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Chy2G036890 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G036890
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L21-1
Genome locationchrH02:11205273..11207872
RNA-Seq ExpressionChy2G036890
SyntenyChy2G036890
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001147 - Ribosomal protein L21e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBS2599571.1 hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium]1.67e-2575Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

TYH54190.1 hypothetical protein ES332_D09G151300v1 [Gossypium tomentosum]6.36e-2654.46Show/hide
Query:  NFTMIAQVAYGMLQSVSSVSRPTSRS--GTKLLRREFMS-----ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPI
        N TM A V  G   S  S  R TSR   G +++R+         + S C     LRK+KND+LK EAKAKG +I TKRQ EGPKP FMV+GA++ETVTPI
Subjt:  NFTMIAQVAYGMLQSVSSVSRPTSRS--GTKLLRREFMS-----ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPI

Query:  LYDVVNDLKGDY
         YDVVNDLKG Y
Subjt:  LYDVVNDLKGDY

XP_004140433.3 60S ribosomal protein L21-1 [Cucumis sativus]2.02e-2573.33Show/hide
Query:  LRREFMSESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        +R E M + S C     LRKVKND+LK EAKAKGT+ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  LRREFMSESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

XP_008443016.1 PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo]1.63e-2475Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

XP_031737587.1 60S ribosomal protein L21-1-like [Cucumis sativus]4.56e-2558.7Show/hide
Query:  VSRPTSRSGTKLLRREFMS-----ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        V+  ++R G +++++         + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  VSRPTSRSGTKLLRREFMS-----ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ0 Uncharacterized protein2.3e-1976.47Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKGT+ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

A0A1S3B7V0 60S ribosomal protein L21-18.9e-1975Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

A0A5D2JHN2 Uncharacterized protein3.1e-1954.46Show/hide
Query:  NFTMIAQVAYGMLQSVSSVSRPTSR--SGTKLLRREF-----MSESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPI
        N TM A V  G   S  S  R TSR   G +++R+         + S C     LRK+KND+LK EAKAKG +I TKRQ EGPKP FMV+GA++ETVTPI
Subjt:  NFTMIAQVAYGMLQSVSSVSRPTSR--SGTKLLRREF-----MSESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPI

Query:  LYDVVNDLKGDY
         YDVVNDLKG Y
Subjt:  LYDVVNDLKGDY

A0A5D3DP20 60S ribosomal protein L21-18.9e-1975Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

A0A6J1F7A4 60S ribosomal protein L21-1-like1.2e-1875Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRKVKND+LK EAKAKG +ICTKRQ EGPKP FMV+GALMETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

SwissProt top hitse value%identityAlignment
Q43291 60S ribosomal protein L21-11.5e-1563.24Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK KND+LK  AKA G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

Q9FDZ9 60S ribosomal protein L21-22.6e-1561.76Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK +ND LK +AKA+G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein1.1e-1663.24Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK KND+LK  AKA G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

AT1G09690.1 Translation protein SH3-like family protein1.1e-1663.24Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK KND+LK  AKA G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

AT1G57660.1 Translation protein SH3-like family protein1.8e-1661.76Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK +ND LK +AKA+G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY

AT1G57860.1 Translation protein SH3-like family protein1.8e-1661.76Show/hide
Query:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY
        + S C     LRK +ND LK +AKA+G  I TKRQ +GPKP FMV+G  +ETVTPI YDVVNDLKG Y
Subjt:  ESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTACCATGATCGCACAGGTCGCGTATGGAATGTTACAAAGCGTGTCATCGGTGTCAAGACCGACAAGCAGGTCGGGAACAAAATTATTGAGAAGAGAA
TTCATGTCGGAGTCGAGCACGTGCAACCTTCTCGATGCATTGAGGAAGGTGAAGAATGACAAGCTGAAGGTCGAAGCCAAGGCCAAAGGCACAATCATCTGCACC
AAAAGACAACTGGAAGGCCCTAAACCAAGGTTCATGGTTAAAGGTGCTTTAATGGAGACTGTGACTCCCATTCTATACGATGTGGTTAATGATCTCAAGGGTGAC
TATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTACCATGATCGCACAGGTCGCGTATGGAATGTTACAAAGCGTGTCATCGGTGTCAAGACCGACAAGCAGGTCGGGAACAAAATTATTGAGAAGAGAA
TTCATGTCGGAGTCGAGCACGTGCAACCTTCTCGATGCATTGAGGAAGGTGAAGAATGACAAGCTGAAGGTCGAAGCCAAGGCCAAAGGCACAATCATCTGCACC
AAAAGACAACTGGAAGGCCCTAAACCAAGGTTCATGGTTAAAGGTGCTTTAATGGAGACTGTGACTCCCATTCTATACGATGTGGTTAATGATCTCAAGGGTGAC
TATTAG
Protein sequenceShow/hide protein sequence
MNFTMIAQVAYGMLQSVSSVSRPTSRSGTKLLRREFMSESSTCNLLDALRKVKNDKLKVEAKAKGTIICTKRQLEGPKPRFMVKGALMETVTPILYDVVNDLKGD
Y