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Chy2G037340 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G037340
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchrH02:11805060..11815423
RNA-Seq ExpressionChy2G037340
SyntenyChy2G037340
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.67e-8375.6Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+VLDICNNN+R+MEEIHNMY LPIVPP +HRGRV+VEE ELDEV HNVEE+   TQ  +Q GYG+PM+MMPTFGVG+ DFEV T 
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR
         YDSGVGPSSSY+DVGPSTSYM+GHR  + EHN Y+Y+EAP  +   QEYQQE ENQEELEQHRVQSR
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.73e-9677.72Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG+PM MMPTF  G+ DFEVG G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+GVGPSSSY+DV PSTSYM+GH  G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+RRPGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.32e-9677.72Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG+PM MMPTF  G+ DFEVG G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+GVGPSSSY+DV PSTSYM+GHR G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+R PGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.06e-7867.93Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADDPQ+VLDICNNNERYMEEIHN+YDLPIVPPP+HRGRVRVEE ELDEV H V+EV  MTQT SQ GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
             VGPSSSY+DV PSTSYM+GH  G+EEHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+P +N+RRPGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.54e-8673.37Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDV +DPQ+VLDICNNNERYME+IHN+YDLPIVPPPVHR R RVEE ELDEV HNVEEVP  TQT SQ GYG+PM MMPTFG G+ D EV  G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+ VGP SSY+DVGPSTSYMYGH  G+ EHN Y+Y+EAP  +   QEYQQE +NQE+ EQHRVQSRRR+P RN++  GCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-6475.6Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+VLDICNNN+R+MEEIHNMY LPIVPP +HRGRV+VEE ELDEV HNVEE+   TQ  +Q GYG+PM+MMPTFGVG+ DFEV T 
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR
         YDSGVGPSSSY+DVGPSTSYM+GHR  + EHN Y+Y+EAP  +   QEYQQE ENQEELEQHRVQSR
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-7477.72Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG+PM MMPTF  G+ DFEVG G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+GVGPSSSY+DV PSTSYM+GH  G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+RRPGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X22.0e-7477.72Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG+PM MMPTF  G+ DFEVG G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+GVGPSSSY+DV PSTSYM+GHR G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+R PGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X23.6e-6067.93Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDVADDPQ+VLDICNNNERYMEEIHN+YDLPIVPPP+HRGRVRVEE ELDEV H V+EV  MTQT SQ GY                      
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
            GVGPSSSY+DV PSTSYM+GH  G+EEHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+P +N+RRPGCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.5e-6973.37Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG
        RSNNARLRDV +DPQ+VLDICNNNERYME+IHN+YDLPIVPPPVHR R RVEE ELDEV HNVEEVP  TQT SQ GYG+PM MMPTFG G+ D EV  G
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGTPMMMMPTFGVGHYDFEVGTG

Query:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         YD+ VGP SSY+DVGPSTSYMYGH  G+ EHN Y+Y+EAP  +   QEYQQE +NQE+ EQHRVQSRRR+P RN++  GCGTH
Subjt:  NYDSGVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATCCACAAAAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGA
TCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTAGAAGAAGTTGAACTCGATGAAGTTTCCCATAATGTGGAAGAAGTGCCTTATATGACACAGACAT
AGAGCCAAATTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGTAGGACATTATGATTTTGAGGTCGGTACAGGAAATTATGATTCAGGGGTCGGTCCATCG
TCTTCATACATAGATGTCGGTCCATCAACTTCTTACATGTATGGACACAGATGTGGCCATGAAGAACATAACACATATATGTATTATGAAGCACCTGTATAGATATTATA
TTGACAAGAGTACCAACAAGAATCAGAGAACCAAGAGGAGCTAGAACAACACAGAGTTCAAAGTCGACGACGAGAACCAACTCGAAATCAACGACGTCCGGGTTGTGGAA
CACATTGA
mRNA sequenceShow/hide mRNA sequence
CAGAGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATCCACAAAAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGA
TCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTAGAAGAAGTTGAACTCGATGAAGTTTCCCATAATGTGGAAGAAGTGCCTTATATGACACAGACAT
AGAGCCAAATTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGTAGGACATTATGATTTTGAGGTCGGTACAGGAAATTATGATTCAGGGGTCGGTCCATCG
TCTTCATACATAGATGTCGGTCCATCAACTTCTTACATGTATGGACACAGATGTGGCCATGAAGAACATAACACATATATGTATTATGAAGCACCTGTATAGATATTATA
TTGACAAGAGTACCAACAAGAATCAGAGAACCAAGAGGAGCTAGAACAACACAGAGTTCAAAGTCGACGACGAGAACCAACTCGAAATCAACGACGTCCGGGTTGTGGAA
CACATTGA
Protein sequenceShow/hide protein sequence
QRSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQTSQIGYGTPMMMMPTFGVGHYDFEVGTGNYDSGVGPSS
SYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPVILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH