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Chy2G037360 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G037360
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchrH02:11814866..11815420
RNA-Seq ExpressionChy2G037360
SyntenyChy2G037360
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.70e-6364.29Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------
        RSNNARLRDVADD Q+VLDICNNN+R+MEEIHNMY LPIVPP +HRGRV+VEE ELDEV HNVEE+   TQ  +Q GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------

Query:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR
             VGPSSSY+DVGPSTSYM+GHR  + EHN Y+Y+EAP  +   QEYQQE ENQEELEQHRVQSR
Subjt:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.35e-7868.48Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------

Query:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
             VGPSSSY+DV PSTSYM+GH  G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+RRPGCGTH
Subjt:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]5.89e-7868.48Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------

Query:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
             VGPSSSY+DV PSTSYM+GHR G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+R PGCGTH
Subjt:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.61e-8579.11Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGVGPSSSYIDVGPSTSYMYGHR
        RSNNARLRDVADDPQ+VLDICNNNERYMEEIHN+YDLPIVPPP+HRGRVRVEE ELDEV H V+EV  MTQT SQ GYGVGPSSSY+DV PSTSYM+GH 
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGVGPSSSYIDVGPSTSYMYGHR

Query:  CGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         G+EEHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+P +N+RRPGCGTH
Subjt:  CGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.23e-7065.22Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------
        RSNNARLRDV +DPQ+VLDICNNNERYME+IHN+YDLPIVPPPVHR R RVEE ELDEV HNVEEVP  TQT SQ GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------

Query:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
             VGP SSY+DVGPSTSYMYGH  G+ EHN Y+Y+EAP  +   QEYQQE +NQE+ EQHRVQSRRR+P RN++  GCGTH
Subjt:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-4864.29Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------
        RSNNARLRDVADD Q+VLDICNNN+R+MEEIHNMY LPIVPP +HRGRV+VEE ELDEV HNVEE+   TQ  +Q GY                      
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------

Query:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR
            GVGPSSSY+DVGPSTSYM+GHR  + EHN Y+Y+EAP  +   QEYQQE ENQEELEQHRVQSR
Subjt:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.3e-6068.48Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GY                      
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------

Query:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
            GVGPSSSY+DV PSTSYM+GH  G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+RRPGCGTH
Subjt:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X29.1e-6068.48Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------
        RSNNARLRDVADD Q+ LDICNNNERYMEEIHNMYDLPIVPPPVHRG VRVEE ELD+V HNVEEVP  TQT SQ GY                      
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGY----------------------

Query:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
            GVGPSSSY+DV PSTSYM+GHR G+ EHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+PTRN+R PGCGTH
Subjt:  ----GVGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X29.4e-6579.11Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGVGPSSSYIDVGPSTSYMYGHR
        RSNNARLRDVADDPQ+VLDICNNNERYMEEIHN+YDLPIVPPP+HRGRVRVEE ELDEV H V+EV  MTQT SQ GYGVGPSSSY+DV PSTSYM+GH 
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYGVGPSSSYIDVGPSTSYMYGHR

Query:  CGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
         G+EEHN Y+Y+EAP  +   QEYQQE ENQE+ EQHRVQSRRR+P +N+RRPGCGTH
Subjt:  CGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.1e-5665.22Show/hide
Query:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------
        RSNNARLRDV +DPQ+VLDICNNNERYME+IHN+YDLPIVPPPVHR R RVEE ELDEV HNVEEVP  TQT SQ GYG                     
Subjt:  RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQT*SQIGYG---------------------

Query:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH
             VGP SSY+DVGPSTSYMYGH  G+ EHN Y+Y+EAP  +   QEYQQE +NQE+ EQHRVQSRRR+P RN++  GCGTH
Subjt:  -----VGPSSSYIDVGPSTSYMYGHRCGHEEHNTYMYYEAPV*ILY*QEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATCCACAAAAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTAC
GATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTAGAAGAAGTTGAACTCGATGAAGTTTCCCATAATGTGGAAGAAGTGCCTTATATGACA
CAGACATAGAGCCAAATTGGTTATGGGGTCGGTCCATCGTCTTCATACATAGATGTCGGTCCATCAACTTCTTACATGTATGGACACAGATGTGGCCATGAAGAA
CATAACACATATATGTATTATGAAGCACCTGTATAGATATTATATTGACAAGAGTACCAACAAGAATCAGAGAACCAAGAGGAGCTAGAACAACACAGAGTTCAA
AGTCGACGACGAGAACCAACTCGAAATCAACGACGTCCGGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
AGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATCCACAAAAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTAC
GATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTAGAAGAAGTTGAACTCGATGAAGTTTCCCATAATGTGGAAGAAGTGCCTTATATGACA
CAGACATAGAGCCAAATTGGTTATGGGGTCGGTCCATCGTCTTCATACATAGATGTCGGTCCATCAACTTCTTACATGTATGGACACAGATGTGGCCATGAAGAA
CATAACACATATATGTATTATGAAGCACCTGTATAGATATTATATTGACAAGAGTACCAACAAGAATCAGAGAACCAAGAGGAGCTAGAACAACACAGAGTTCAA
AGTCGACGACGAGAACCAACTCGAAATCAACGACGTCCGGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
RSNNARLRDVADDPQKVLDICNNNERYMEEIHNMYDLPIVPPPVHRGRVRVEEVELDEVSHNVEEVPYMTQTSQIGYGVGPSSSYIDVGPSTSYMYGHRCGHEEH
NTYMYYEAPV*ILYQEYQQESENQEELEQHRVQSRRREPTRNQRRPGCGTH*