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Chy2G038030 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G038030
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchrH02:13306073..13307954
RNA-Seq ExpressionChy2G038030
SyntenyChy2G038030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.53e-0836.84Show/hide
Query:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL---------------------------------SAGRSPLPKRRWECWTSPTTS*
        Y ++Y +     GQVKGV V  IVGVV F G+ EIIH+ESDL+VL                                 SAGR+PL +R  + W       
Subjt:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL---------------------------------SAGRSPLPKRRWECWTSPTTS*

Query:  SL*TLLYWVCPTQR
             LYW CPTQR
Subjt:  SL*TLLYWVCPTQR
TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]3.36e-0634.75Show/hide
Query:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL-------------------------------------SAGRSPLPKRRWECWTSP
        Y ++Y +     GQVKGV V  IVGVV F G+ EIIH+ESDL+VL                                     SAGR+PL +R  + W   
Subjt:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL-------------------------------------SAGRSPLPKRRWECWTSP

Query:  TTS*SL*TLLYWVCPTQR
                 LYW C TQR
Subjt:  TTS*SL*TLLYWVCPTQR
TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein2.7e-0636.84Show/hide
Query:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL---------------------------------SAGRSPLPKRRWECWTSPTTS*
        Y ++Y +     GQVKGV V  IVGVV F G+ EIIH+ESDL+VL                                 SAGR+PL +R  + W       
Subjt:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL---------------------------------SAGRSPLPKRRWECWTSPTTS*

Query:  SL*TLLYWVCPTQR
             LYW CPTQR
Subjt:  SL*TLLYWVCPTQR
A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein6.7e-0534.75Show/hide
Query:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL-------------------------------------SAGRSPLPKRRWECWTSP
        Y ++Y +     GQVKGV V  IVGVV F G+ EIIH+ESDL+VL                                     SAGR+PL +R  + W   
Subjt:  YYSIYYKFYEETGQVKGVFVRAIVGVVQF*GIPEIIHRESDLYVL-------------------------------------SAGRSPLPKRRWECWTSP

Query:  TTS*SL*TLLYWVCPTQR
                 LYW C TQR
Subjt:  TTS*SL*TLLYWVCPTQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGCTTGAGCAAATTCTGATGTTCATTGGGTGAATTTTGACAAAGTAAACAGGGCAGGTGGTTTTCATGCGAAATCAGAAAGGTGTACCGATAGAGTTAGGAT
CTCTATTTAGTATGGTTAGAAATATTATTCAATTTACTACAAATTTTATGAAGAAACCGGACAAGTTAAAGGGGTCTTTGTACGCGCGATTGTTGGAGTGGTTCAGTTTT
GAGGGATACCTGAGATTATACACAGAGAATCAGATTTATATGTCTTGAGTGCTGGGCGGTCCCCACTACCAAAAAGACGATGGGAGTGTTGGACGAGCCCCACTACATCG
TAGAGCTTGTAAACGTTGTTGTACTGGGTGTGCCCTACACAACGAGTCTCCAGGCTTACTCGTGAAATCACAAAGTCGACAGATACAGATAGAGAAAAGCATTTTCTATC
GGCTTCACGCCGTCTTTCGGTCTGAGCTAGCAGGTAGTCCAGGAGGGAGTGTGACA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGCTTGAGCAAATTCTGATGTTCATTGGGTGAATTTTGACAAAGTAAACAGGGCAGGTGGTTTTCATGCGAAATCAGAAAGGTGTACCGATAGAGTTAGGAT
CTCTATTTAGTATGGTTAGAAATATTATTCAATTTACTACAAATTTTATGAAGAAACCGGACAAGTTAAAGGGGTCTTTGTACGCGCGATTGTTGGAGTGGTTCAGTTTT
GAGGGATACCTGAGATTATACACAGAGAATCAGATTTATATGTCTTGAGTGCTGGGCGGTCCCCACTACCAAAAAGACGATGGGAGTGTTGGACGAGCCCCACTACATCG
TAGAGCTTGTAAACGTTGTTGTACTGGGTGTGCCCTACACAACGAGTCTCCAGGCTTACTCGTGAAATCACAAAGTCGACAGATACAGATAGAGAAAAGCATTTTCTATC
GGCTTCACGCCGTCTTTCGGTCTGAGCTAGCAGGTAGTCCAGGAGGGAGTGTGACA
Protein sequenceShow/hide protein sequence
MKKAANSDVHWVNFDKVNRAGGFHAKSERCTDRVRISI*YG*KYYSIYYKFYEETGQVKGVFVRAIVGVVQFGIPEIIHRESDLYVLSAGRSPLPKRRWECWTSPTTS*S
L*TLLYWVCPTQRVSRLTREITKSTDTDREKHFLSASRRLSVASR*SRRECDX