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Chy2G038320 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G038320
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionExpansin-like A2
Genome locationchrH02:13807919..13813545
RNA-Seq ExpressionChy2G038320
SyntenyChy2G038320
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952669.1 expansin-like A3 [Cucurbita moschata]1.92e-0763.16Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF +  FFFLVSS TACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

XP_022969218.1 expansin-like A3 [Cucurbita maxima]1.92e-0763.16Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF +  FFFLVSS TACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

XP_023554581.1 expansin-like A3 [Cucurbita pepo subsp. pepo]6.95e-0760.53Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF ++ FF LVSS TACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

XP_038888736.1 expansin-like A3 [Benincasa hispida]1.01e-0765.79Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAW  +L FFFLVSSVTACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

XP_038888822.1 expansin-like A1 [Benincasa hispida]2.67e-0765.79Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF   L FFL+SSV ACDRC+ Q+K AHYY+D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

TrEMBL top hitse value%identityAlignment
A0A0A0K1G6 Uncharacterized protein8.7e-0560.53Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF +L FFFLVS   ACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

A0A1S3BIG9 Expansin A3-like protein3.9e-0544.26Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTSSLKGKGEELLKIDILDVKYTRAM
        MAWF +L FFFLVS   ACDRC++++K  HYY D  TS     G   L ++  D  ++ A+
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTSSLKGKGEELLKIDILDVKYTRAM

A0A5A7TFD4 Expansin-like A33.9e-0544.26Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTSSLKGKGEELLKIDILDVKYTRAM
        MAWF +L FFFLVS   ACDRC++++K  HYY D  TS     G   L ++  D  ++ A+
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTSSLKGKGEELLKIDILDVKYTRAM

A0A6J1GMD8 expansin-like A31.3e-0563.16Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF +  FFFLVSS TACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

A0A6J1I0C6 expansin-like A31.3e-0563.16Show/hide
Query:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS
        MAWF +  FFFLVSS TACDRC++++K  HYY D  TS
Subjt:  MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTTTCAAAACTTACTTTTCTTCTTCCTTGTCTCTTCAGTAACTGCTTGTGATCGTTGTGTTTACCAAACTAAGACTGCTCATTATTACGATGATGGAAGTAC
TTCATCTTTAAAAGGCAAAGGTGAAGAACTTTTGAAGATTGATATCTTGGATGTAAAATACACGAGAGCAATGAGCCGAAAAAACCCGCATAATACTCTTGAGAGCACTC
AACTTCTCAAAAAGTACTTGAAGAACTTGAGAGATTGGGAGCAAAAAGCAACAACCCAGCAGAAGAAGACGAGAAGATTGAAGAAAGAGGAGCAGGAACCACCAGGAGCA
AGACAGAAATCTGAAGACGCAGATCAGGAACATGTGCTTCGTGCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGTTTCAAAACTTACTTTTCTTCTTCCTTGTCTCTTCAGTAACTGCTTGTGATCGTTGTGTTTACCAAACTAAGACTGCTCATTATTACGATGATGGAAGTAC
TTCATCTTTAAAAGGCAAAGGTGAAGAACTTTTGAAGATTGATATCTTGGATGTAAAATACACGAGAGCAATGAGCCGAAAAAACCCGCATAATACTCTTGAGAGCACTC
AACTTCTCAAAAAGTACTTGAAGAACTTGAGAGATTGGGAGCAAAAAGCAACAACCCAGCAGAAGAAGACGAGAAGATTGAAGAAAGAGGAGCAGGAACCACCAGGAGCA
AGACAGAAATCTGAAGACGCAGATCAGGAACATGTGCTTCGTGCTTCTTGA
Protein sequenceShow/hide protein sequence
MAWFQNLLFFFLVSSVTACDRCVYQTKTAHYYDDGSTSSLKGKGEELLKIDILDVKYTRAMSRKNPHNTLESTQLLKKYLKNLRDWEQKATTQQKKTRRLKKEEQEPPGA
RQKSEDADQEHVLRAS