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Chy2G038340 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G038340
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionIntegrase
Genome locationchrH02:13870615..13870836
RNA-Seq ExpressionChy2G038340
SyntenyChy2G038340
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041660.1 integrase [Cucumis melo var. makuwa]7.10e-2778.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

KAA0052790.1 integrase [Cucumis melo var. makuwa]2.60e-2779.45Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHIIVAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

KAA0053129.1 integrase [Cucumis melo var. makuwa]1.83e-2678.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

KAA0065484.1 integrase [Cucumis melo var. makuwa]3.73e-2878.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

XP_038877452.1 uncharacterized protein LOC120069734 [Benincasa hispida]9.55e-3290.14Show/hide
Query:  DADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        DA+TIE+FFNRVLLIVNQLRSN ETIE+QRVVEKILR MTRRYEHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  DADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

TrEMBL top hitse value%identityAlignment
A0A5A7UC82 Integrase3.0e-2179.45Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHIIVAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

A0A5A7UZJ8 Integrase3.9e-2178.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

A0A5D3BQ81 Integrase3.9e-2178.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

A0A5D3CLV1 Integrase3.9e-2178.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

A0A5D3E3T2 Integrase3.9e-2178.08Show/hide
Query:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH
        MK+ +TIEEFFNR+L+IVN LRSN E + +QRVVEKILRSM R++EHI+VAIEESKDLSTLSINSLM SLQSH
Subjt:  MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATGCTGATACTATTGAAGAATTTTTCAACCGTGTTCTCCTAATTGTTAATCAATTGAGATCAAATAGAGAAACAATTGAAAATCAAAGGGTAGTTGAGAAGAT
CCTTAGAAGCATGACTAGAAGATATGAGCATATTATTGTAGCAATTGAAGAATCCAAAGATTTGTCAACTCTCTCCATAAATAGCTTAATGGAATCTCTTCAATCTCATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATGCTGATACTATTGAAGAATTTTTCAACCGTGTTCTCCTAATTGTTAATCAATTGAGATCAAATAGAGAAACAATTGAAAATCAAAGGGTAGTTGAGAAGAT
CCTTAGAAGCATGACTAGAAGATATGAGCATATTATTGTAGCAATTGAAGAATCCAAAGATTTGTCAACTCTCTCCATAAATAGCTTAATGGAATCTCTTCAATCTCATT
AG
Protein sequenceShow/hide protein sequence
MKDADTIEEFFNRVLLIVNQLRSNRETIENQRVVEKILRSMTRRYEHIIVAIEESKDLSTLSINSLMESLQSH