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Chy2G039730 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G039730
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L21-1
Genome locationchrH02:17343615..17344189
RNA-Seq ExpressionChy2G039730
SyntenyChy2G039730
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001147 - Ribosomal protein L21e
IPR036948 - Ribosomal protein L21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140433.3 60S ribosomal protein L21-1 [Cucumis sativus]8.88e-4065.49Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E M  S       L + +NDELK E+KAKG +ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

XP_008443016.1 PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo]8.88e-4065.49Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKGV+ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

XP_022983129.1 60S ribosomal protein L21-1-like [Cucurbita maxima]1.03e-3858.97Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSESSTIS---------LEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  VWNVTK AIG EI+K    + G +++R+        +          L + +ND+LK E+KAKG +ICTKRQP+GPKPGFMVEGALM+
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSESSTIS---------LEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

XP_031739289.1 60S ribosomal protein L21-1 [Cucumis sativus]3.60e-3964.6Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKG +ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

XP_038906379.1 60S ribosomal protein L21-1 [Benincasa hispida]7.23e-3964.6Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKG +ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ0 Uncharacterized protein3.9e-3064.6Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKG +ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

A0A1S3B7V0 60S ribosomal protein L21-11.3e-3065.49Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKGV+ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

A0A5D3DP20 60S ribosomal protein L21-11.3e-3065.49Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP
        MPHKFYH RT  VWNVTK AIG EI+K    R   K +  R E +  S       L + +NDELK E+KAKGV+ICTKRQP+GPKPGFMVEGALM+TVTP
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTP

Query:  IPYDIVNDLKGGY
        IPYD+VNDLKGGY
Subjt:  IPYDIVNDLKGGY

A0A6J1IYF0 60S ribosomal protein L21-16.7e-3058.97Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSE---------SSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  VWNVTK AIG EI+K    + G +++R+              +    L + +ND+LK E+KAKG +ICTKRQP+GPKPGFMVEGALM+
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSE---------SSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

A0A6J1J6F8 60S ribosomal protein L21-1-like6.7e-3058.97Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSE---------SSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  VWNVTK AIG EI+K    + G +++R+              +    L + +ND+LK E+KAKG +ICTKRQP+GPKPGFMVEGALM+
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSE---------SSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

SwissProt top hitse value%identityAlignment
O82574 60S ribosomal protein L211.2e-0739.25Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSESS---TISLEEGENDELKPESK-AKGVIICTKRQPKGPKPGFMV--EGALMDT
        MP K+YH RT  VWNVTK AIG EI+K   +R   K +  R + + +SS   +      END++K ++  AK  +  TKR P  PK G ++  +G + +T
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL--RREFMSESS---TISLEEGENDELKPESK-AKGVIICTKRQPKGPKPGFMV--EGALMDT

Query:  VTPIPYD
           IPY+
Subjt:  VTPIPYD

Q43291 60S ribosomal protein L21-14.2e-2954.7Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +NDELK  +KA G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

Q54X53 60S ribosomal protein L219.1e-0833.93Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL------RREFMSESSTISL---EEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  VWNVT  A+G  I+K    R G +++      R E +  S++++       EN +   E+K  G  +  +R P  PK GF V     +
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLL------RREFMSESSTISL---EEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  --TVTPIPYDIV
           V P+ Y+++
Subjt:  --TVTPIPYDIV

Q6QN05 60S ribosomal protein L211.2e-0731.48Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYG-----FYRSGIKLLRREFMSESSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMV--EGALMDTV
        MPHK YH +T  V+NVT+ A+G  ++K         R  +++   +      +      END+ K E+K KG  +  KRQP  P+    V   G   + +
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYG-----FYRSGIKLLRREFMSESSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMV--EGALMDTV

Query:  TPIPYDIV
         PIPY+ +
Subjt:  TPIPYDIV

Q9FDZ9 60S ribosomal protein L21-25.5e-2953.85Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +ND LK ++KA+G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein3.0e-3054.7Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +NDELK  +KA G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

AT1G09690.1 Translation protein SH3-like family protein3.0e-3054.7Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +NDELK  +KA G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

AT1G57660.1 Translation protein SH3-like family protein3.9e-3053.85Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +ND LK ++KA+G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY

AT1G57860.1 Translation protein SH3-like family protein3.9e-3053.85Show/hide
Query:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD
        MPHKFYH RT  +WNVTK A+G E++K    + G +++R+      E + +S       L + +ND LK ++KA+G  I TKRQPKGPKPGFMVEG  ++
Subjt:  MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRR------EFMSES---STISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMD

Query:  TVTPIPYDIVNDLKGGY
        TVTPIPYD+VNDLKGGY
Subjt:  TVTPIPYDIVNDLKGGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCATAAATTTTACCACAGTCGCACGACTCACGTATGGAATGTTACAAAGCTTGCCATCGGCTTCGAGATCGACAAATATGGATTTTACAGGTCGGGAATA
AAATTATTAAGAAGAGAATTCATGTCGGAGTCTAGCACAATTTCGCTTGAGGAAGGTGAAAATGACGAGTTGAAGCCTGAATCCAAGGCCAAAGGTGTAATCATC
TGCACCAAGAGGCAACCGAAAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTTTAATGGACACTGTGACTCCCATTCCATACGATATAGTTAATGATCTCAAG
GGTGGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCATAAATTTTACCACAGTCGCACGACTCACGTATGGAATGTTACAAAGCTTGCCATCGGCTTCGAGATCGACAAATATGGATTTTACAGGTCGGGAATA
AAATTATTAAGAAGAGAATTCATGTCGGAGTCTAGCACAATTTCGCTTGAGGAAGGTGAAAATGACGAGTTGAAGCCTGAATCCAAGGCCAAAGGTGTAATCATC
TGCACCAAGAGGCAACCGAAAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTTTAATGGACACTGTGACTCCCATTCCATACGATATAGTTAATGATCTCAAG
GGTGGCTATTAG
Protein sequenceShow/hide protein sequence
MPHKFYHSRTTHVWNVTKLAIGFEIDKYGFYRSGIKLLRREFMSESSTISLEEGENDELKPESKAKGVIICTKRQPKGPKPGFMVEGALMDTVTPIPYDIVNDLK
GGY