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Chy2G039910 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G039910
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationchrH02:17862767..17863216
RNA-Seq ExpressionChy2G039910
SyntenyChy2G039910
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042555.1 succinate dehydrogenase assembly factor 4 [Cucumis melo var. makuwa]6.26e-3076.14Show/hide
Query:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        TLS LP V  LTSNSLS FV SSSNQ+PSRSEQGVS+EEQ+EAEKGSS NQHE  GDDRG QD GVDT KM  EI GPK  EPTRY D
Subjt:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]2.20e-3076.14Show/hide
Query:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        TLS LPAVS LT NSLS FV SSSNQ+PSR E+GVS+EEQ+EA KGSS N+HE  GDDRGGQD GVDT KMT EI GPK PEPTRY D
Subjt:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]1.85e-1858.62Show/hide
Query:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        L+ L AV+  TS S+S  V SS+NQ+PSR EQGV  EEQ+EA KGS  +QHE  GDDR  +D G D  K T E+ GPK PEPTRY D
Subjt:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]3.28e-1958.62Show/hide
Query:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        L+ L AV+ +TS S+S  V SS+NQ+PSR EQGV  EEQ+EA KGS  +QHE  GDDR  +D G D  K T E+ GPK PEPTRY D
Subjt:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]1.31e-1858.62Show/hide
Query:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        L++L AV+  TS S+S  V SS+NQ+PSR EQGV  EEQ+EA KGS  +QHE  GDDR  +D G D  K T E+ GPK PEPTRY D
Subjt:  LSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial5.4e-2272.92Show/hide
Query:  SCPPPLSSTLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        S PP    TLS LPAVS LT NSLS FV SSSNQ+PSR E+GVS+EEQ+EA KGSS N+HE  GDDRGGQD GVDT KMT EI GPK PEPTRY D
Subjt:  SCPPPLSSTLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial1.6e-2165.18Show/hide
Query:  SSHSSTVEPPPPYCLPSCPPPLSSTLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIE
        SSH S +   PP            TLS LP V  LTSNSLS FV SSSNQ+PSRSEQGVS+EEQ+EAEKGSS NQHE  GDDRG QD GVDT KM  EI 
Subjt:  SSHSSTVEPPPPYCLPSCPPPLSSTLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIE

Query:  GPKDPEPTRYSD
        GPK  EPTRY D
Subjt:  GPKDPEPTRYSD

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial4.6e-1357.95Show/hide
Query:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        +L+ L AV+  TS S+S  V SS+NQ+PSR EQGV  EEQ+EA KGS  +QHE  GDDR  +D G D  K T E+ GPK PEPTRY D
Subjt:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial1.2e-1357.95Show/hide
Query:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD
        +L+ L AV+ +TS S+S  V SS+NQ+PSR EQGV  EEQ+EA KGS  +QHE  GDDR  +D G D  K T E+ GPK PEPTRY D
Subjt:  TLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSSNQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGCCCTACCCCTTTCACTCGGCTATCTCATCTTCCTCTCATCTTCAAAAAATTTCTTCCCTCTCATCTTCCTCTCATTCCAAACTCCCCACCCAAACCCTCTCTTCTC
AAGCAGTCACTCTTCCACCGTCGAACCACCACCACCGTACTGTTTGCCTTCGTGCCCACCACCATTGTCGTCGACTCTCTCTACCCTACCGGCGGTGAGTAGCTTAACTT
CCAACTCGTTGAGCCCATTCGTTATCTCCTCGTCCAATCAAGAACCTTCTCGATCGGAGCAAGGTGTGTCTAACGAGGAGCAACAAGAGGCCGAGAAAGGAAGTTCATCG
AATCAACATGAGGTTGATGGAGATGACCGAGGTGGTCAAGATGGAGGAGTTGATACAGGAAAAATGACCCACGAGATCGAAGGACCAAAAGACCCCGAGCCCACCCGTTA
CAGCGATTAG
mRNA sequenceShow/hide mRNA sequence
CTTGCCCTACCCCTTTCACTCGGCTATCTCATCTTCCTCTCATCTTCAAAAAATTTCTTCCCTCTCATCTTCCTCTCATTCCAAACTCCCCACCCAAACCCTCTCTTCTC
AAGCAGTCACTCTTCCACCGTCGAACCACCACCACCGTACTGTTTGCCTTCGTGCCCACCACCATTGTCGTCGACTCTCTCTACCCTACCGGCGGTGAGTAGCTTAACTT
CCAACTCGTTGAGCCCATTCGTTATCTCCTCGTCCAATCAAGAACCTTCTCGATCGGAGCAAGGTGTGTCTAACGAGGAGCAACAAGAGGCCGAGAAAGGAAGTTCATCG
AATCAACATGAGGTTGATGGAGATGACCGAGGTGGTCAAGATGGAGGAGTTGATACAGGAAAAATGACCCACGAGATCGAAGGACCAAAAGACCCCGAGCCCACCCGTTA
CAGCGATTAG
Protein sequenceShow/hide protein sequence
LALPLSLGYLIFLSSSKNFFPLIFLSFQTPHPNPLFSSSHSSTVEPPPPYCLPSCPPPLSSTLSTLPAVSSLTSNSLSPFVISSSNQEPSRSEQGVSNEEQQEAEKGSSS
NQHEVDGDDRGGQDGGVDTGKMTHEIEGPKDPEPTRYSD