CuGenDBv2

Gene ID	Chy2G040430
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ribosomal protein S7
Genome location	chrH02:19262746..19265110
RNA-Seq Expression	Chy2G040430
Synteny	Chy2G040430
Gene Ontology terms	GO:0000028 - ribosomal small subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0005763 - mitochondrial small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000235 - Ribosomal protein S5/S7 IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAW28841.1 ribosomal protein S7, partial [Lonicera sp. Bergthorsson 0301]

1.21e-17

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

AHF22567.1 ribosomal protein S7, partial [Fragaria iinumae]

1.45e-17

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

PRQ15605.1 putative ribosomal protein S5/S7 [Rosa chinensis]

1.45e-17

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

QHB79536.1 ribosomal protein S7 [Sesuvium portulacastrum]

4.33e-17

95.45

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRI+YRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

YP_004849323.1 ribosomal protein S7 [Cucumis sativus]

1.57e-17

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

TrEMBL top hits

e value

%identity

Alignment

A0A0B4KZZ7 Ribosomal protein S7 (Fragment)

8.3e-14

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

A0A0B4L075 Ribosomal protein S7 (Fragment)

8.3e-14

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

A0A0B4L099 Ribosomal protein S7 (Fragment)

8.3e-14

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

A0A0B4L0P4 Ribosomal protein S7 (Fragment)

8.3e-14

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

A0A0B4L207 Ribosomal protein S7 (Fragment)

8.3e-14

97.73

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSFDE LDAYRKRGIA
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

SwissProt top hits

e value

%identity

Alignment

P26867 Ribosomal protein S7, mitochondrial

8.8e-05

55.56

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Query:  DRQQTLAIRWILEAAFKRRISYR-ISLEKCSFDERLDAYRKRGIA
        +RQ+TLAIRW+LE+A KRR+  + ISL++C + E L+A +K GIA
Subjt:  DRQQTLAIRWILEAAFKRRISYR-ISLEKCSFDERLDAYRKRGIA

P92557 Ribosomal protein S7, mitochondrial

2.7e-14

90.91

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSF E LDAY+KRG A
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

Q01902 Ribosomal protein S7, mitochondrial

2.7e-14

90.91

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWIL AAFKRRISYRISLEKCSF E LDAYRKRGI+
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

Q9MF82 Ribosomal protein S7, mitochondrial

2.5e-15

93.18

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKC FDE LDAYRKRGI+
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

Arabidopsis top hits

e value

%identity

Alignment

AT2G07696.1 Ribosomal protein S7p/S5e family protein

1.9e-15

90.91

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSF E LDAY+KRG A
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

ATMG01270.1 mitochondrial ribosomal protein S7

1.9e-15

90.91

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Query:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA
        DRQQTLAIRWILEAAFKRRISYRISLEKCSF E LDAY+KRG A
Subjt:  DRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIA

Sequences

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CDS sequence

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ATGCGTGAGAAAGGAGCTCAATCTCTTCTTTCCAGTCATATGAATACCGAGTCAACTCAGTCGGTCGAGCATACCTCTGACGCTTCCTCCCTAGCTTCTACGAGTCGTAC
TGAATTATCCAATTTCATGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGAATAAGCTTAGAGAAATGTTCAT
TTGATGAGAGATTGGATGCTTACCGAAAGAGGGGAATTGCACTGTACTTTAGGAAGCTTTCGATCAATTACCCGCTAGAGTTCATCAAAAGAAAACTACTAAACAAGGAG
CTTACCAGTTCCTTTGTTTACGAGGCTGAGTCTGAAGCAGAGGTTAGGGCAACCCCTACCCCTAGGGCTCGGGGGGAAGGGTACCCAGGGGAAGGTTATGTTCTCCTCTT
TGAACGACTTTTCCAGGACGGGGGATTTGATGAGAAAGAGGATCGAGGCCTTAAGCGGAGTCAGACTTGGTCAGGGGATAAGCTTCAGAGGAAGAAAAAGAAAGAGAAGA
GGTCGACAGGTCACATCCCGAACAACAAGGGAATTCCCTCTTTCAGAAGAGTTGGGTGCTACAGAGAGAGCTCCTTCTTCCATGAATCATCAGAAGTTAGCATTCTCAGT
TTCATAGGAATCAGTCCCACCTGCTGA

mRNA sequence

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Protein sequence

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MREKGAQSLLSSHMNTESTQSVEHTSDASSLASTSRTELSNFMDRQQTLAIRWILEAAFKRRISYRISLEKCSFDERLDAYRKRGIALYFRKLSINYPLEFIKRKLLNKE
LTSSFVYEAESEAEVRATPTPRARGEGYPGEGYVLLFERLFQDGGFDEKEDRGLKRSQTWSGDKLQRKKKKEKRSTGHIPNNKGIPSFRRVGCYRESSFFHESSEVSILS
FIGISPTC

Chy2G040430 (gene) of Cucumber (hystrix) v1 genome