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Chy2G040720 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G040720
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDynein light chain
Genome locationchrH02:19952877..19957954
RNA-Seq ExpressionChy2G040720
SyntenyChy2G040720
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150050.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.29e-2095.74Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN
        MLEGKATVKETDM EKMQMHAMASASQALDLFDVSDSLSLASHIKK+
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN

XP_008462685.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]5.00e-1889.36Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN
        MLEGKATVKETDM EKMQMHAMASAS ALDLFDVSD LSLAS+IKK+
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN

XP_022144999.1 dynein light chain 1, cytoplasmic-like [Momordica charantia]2.36e-1684.78Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGK  VKETDM EKMQ+HAMASAS ALDLFDVSD LSLA+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

XP_022933771.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.71e-1684.78Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKATVK+TDM EKMQ+HA ASAS ALDLFDVSD LSLA+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

XP_038878771.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]1.79e-1889.36Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN
        MLEGKATVKETDM EKMQ HAMASAS ALDLFDVSDSLSLA+HIKK+
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN

TrEMBL top hitse value%identityAlignment
A0A1S3CJ38 Dynein light chain9.6e-1289.36Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN
        MLEGKATVKETDM EKMQMHAMASAS ALDLFDVSD LSLAS+IKK+
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKN

A0A6J0ZN37 Dynein light chain2.0e-0978.26Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKA +KETDM EKMQ  AMASASQALDL+DVSD +S+A+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

A0A6J1CTX2 Dynein light chain1.8e-1084.78Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGK  VKETDM EKMQ+HAMASAS ALDLFDVSD LSLA+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

A0A6J1EZZ1 Dynein light chain1.4e-1084.78Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKATVK+TDM EKMQ+HA ASAS ALDLFDVSD LSLA+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

A0A6J1I806 Dynein light chain1.4e-1084.78Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKATVK+TDM EKMQ+HA ASAS ALDLFDVSD LSLA+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 114.0e-1071.74Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKA V+++DM  KMQM AMA ASQALDLFDV D  S+A HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

AT1G52240.2 RHO guanyl-nucleotide exchange factor 114.0e-1071.74Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKA V+++DM  KMQM AMA ASQALDLFDV D  S+A HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

AT3G16120.1 Dynein light chain type 1 family protein3.6e-1173.91Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKA V+ETDM  KMQM AM  ASQ+LDLFDV DS+S+A+HIKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK

AT4G27360.1 Dynein light chain type 1 family protein3.9e-0550Show/hide
Query:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK
        MLEGKA + +TDM + M+  A++ AS+ALD FDV++   +A  IKK
Subjt:  MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTTGGAGAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCAAGCCCTCGATCTCTTCGACGTCTCCGATTC
CCTCTCCCTTGCTTCCCATATCAAGAAGAACACCATGTACATTCCTATAGATAATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTTGGAGAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCAAGCCCTCGATCTCTTCGACGTCTCCGATTC
CCTCTCCCTTGCTTCCCATATCAAGAAGAACACCATGTACATTCCTATAGATAATGATTGA
Protein sequenceShow/hide protein sequence
MLEGKATVKETDMLEKMQMHAMASASQALDLFDVSDSLSLASHIKKNTMYIPIDND