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Chy2G041030 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041030
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchrH02:20492495..20496231
RNA-Seq ExpressionChy2G041030
SyntenyChy2G041030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.25e-3342.79Show/hide
Query:  IMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHKSLDIPLWEIGFYPTIGPMGG-IGYSPLLIL----------FVCGLADWKFSYES
        IM ET    S+ H RIQV         FQPFN +  +LES L AHKS D PLW+IG+YPTI  MGG I YSPLL+L           VCGL DW+FSYES
Subjt:  IMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHKSLDIPLWEIGFYPTIGPMGG-IGYSPLLIL----------FVCGLADWKFSYES

Query:  NVANNKIHEATEPWNLVKKMKRLQHCEN*T*YYV*ILSSKYSIEEKSS*SRNRFEVVKTNELCFGNRERKVEKRSQEMGPASC*C*KRFEQGKTKVVRPG
        N+ANNKIHEA E W  VKKMK L+HCE  T  Y    +S+  I   +        +V   EL   + + K  KR +EM      C    E  K +     
Subjt:  NVANNKIHEATEPWNLVKKMKRLQHCEN*T*YYV*ILSSKYSIEEKSS*SRNRFEVVKTNELCFGNRERKVEKRSQEMGPASC*C*KRFEQGKTKVVRPG

Query:  EGYRVFKYQGNLSE--RKEIEIIKEHCRL
           +    Q +L E  RK +E+ KE+  L
Subjt:  EGYRVFKYQGNLSE--RKEIEIIKEHCRL

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]4.56e-2339.25Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHK
        M E FRSLNHC IQG+GKFFS AP LF +                         I       N+  + +I+            P+N + +++     AH 
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHK

Query:  SLDIPLWEIGFYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
            P  E G Y      GGI YSPLL+L           VCGL DW+FSYESN+AN+KIHEA E W  VKKMK L+HCE  T  Y
Subjt:  SLDIPLWEIGFYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

KGN51408.1 hypothetical protein Csa_007736 [Cucumis sativus]5.25e-0837.97Show/hide
Query:  EIGFYPTIGPMGGIGYSPLLILF----------VCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
        ++ F   +G  GGI YSPLL+L           + GL DW FSYE++    K+ E  E W +V+++K L+HC+  T  Y
Subjt:  EIGFYPTIGPMGGIGYSPLLILF----------VCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

MBA0670991.1 hypothetical protein [Gossypium klotzschianum]1.53e-0525.84Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLS--NNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGA
        +TE FRSLN C   G G+F   A  L  +F  +F+           + N V+  +  E+ S     +  +R   +   ++  +FQ          +    
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLS--NNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGA

Query:  HKSLDIPLWEIGFYPTIGPMGGIGYSPLLIL-------FVC---GLADWKFSYESNVANNKIHEATEPWNLVKKMKRL
           +     +  + P +G  G IGY+PLL+L       FV    GLA+ +FSY+ +    K  +    WN  ++M+RL
Subjt:  HKSLDIPLWEIGFYPTIGPMGGIGYSPLLIL-------FVC---GLADWKFSYESNVANNKIHEATEPWNLVKKMKRL

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.78e-2435.17Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*---GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLG
        MTE FRSLNHC IQG+GKFFS AP LF +           G L I  +   N+    I +   ++     T        EFG V+  F    +++++   
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*---GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLG

Query:  AHKSLDIPLW----EIGFYPTIGPMGG-IGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YYV*ILSS
        A   L  PL     ++     +G  GG I YSPLL+L           VCGL DW+FSYESN+ANNKIHEA E W  VKKMK L+HCE  T  Y    +S
Subjt:  AHKSLDIPLW----EIGFYPTIGPMGG-IGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YYV*ILSS

Query:  KYSIEEKSS*SRNRFEVVKTNELCFGNRERKVEKRSQEMGPASC*C*KRFEQGKTKVVRPGEGYRVFKYQGNLSE--RKEIEIIKEHCRL
        +  I   +        +V   EL   + + K  KR +EM      C    E  K +        +    Q +L E  RK +E+ KE+  L
Subjt:  KYSIEEKSS*SRNRFEVVKTNELCFGNRERKVEKRSQEMGPASC*C*KRFEQGKTKVVRPGEGYRVFKYQGNLSE--RKEIEIIKEHCRL

TrEMBL top hitse value%identityAlignment
A0A0A0KP72 Uncharacterized protein6.6e-0639.47Show/hide
Query:  FYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
        F   +G  GGI YSPLL+L           + GL DW FSYE++    K+ E  E W +V+++K L+HC+  T  Y
Subjt:  FYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

A0A5A7SNY0 Glial fibrillary acidic protein-like1.9e-2957.14Show/hide
Query:  IMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHKSLDIPLWEIGFYPTIGPM-GGIGYSPLLIL----------FVCGLADWKFSYES
        IM ET    S+ H RIQ         VFQPFN +  +LES L AHKS D PLW+IG+YPTI  M GGI YSPLL+L           VCGL DW+FSYES
Subjt:  IMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHKSLDIPLWEIGFYPTIGPM-GGIGYSPLLIL----------FVCGLADWKFSYES

Query:  NVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
        N+ANNKIHEA E W  VKKMK L+HCE  T  Y
Subjt:  NVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

A0A5A7SUT0 Reverse transcriptase1.5e-2139.25Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHK
        M E FRSLNHC IQG+GKFFS AP LF +                         I       N+  + +I+            P+N + +++     AH 
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGAHK

Query:  SLDIPLWEIGFYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
            P  E G Y      GGI YSPLL+L           VCGL DW+FSYESN+AN+KIHEA E W  VKKMK L+HCE  T  Y
Subjt:  SLDIPLWEIGFYPTIGPMGGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

A0A5D3D0S2 Glial fibrillary acidic protein-like6.6e-2241.24Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI---*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLG
        MTE FRSLNHC IQG+GKFFS AP LF +           G L I  +   N+      + T+   +  H      ++ EFG V+  F    +++++   
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI---*GILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLG

Query:  AHKSLDIPL----WEIGFYPTIGPM-GGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY
        A   L  PL     ++     +G   GGI YSPLL+L           VCGL DW+FSYESN+ANNKIHEA E W  VKKMK L+HCE  T  Y
Subjt:  AHKSLDIPL----WEIGFYPTIGPM-GGIGYSPLLIL----------FVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCEN*T*YY

A0A7J9FUR3 Uncharacterized protein (Fragment)5.6e-0526.97Show/hide
Query:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLS--NNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGA
        + E FRSLN C   G G+F   A  L  +F   F+         T+R   V+  +  E  S     +  TR   +   ++  +FQ          +    
Subjt:  MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYI*GILIILDTLR*NSVARGIMQETLS--NNSIVHTRIQVLQNLEFGCVFQPFNGS*SSLESSLGA

Query:  HKSLDIPLWEIGFYPTIGPMGGIGYSPLLIL-------FV---CGLADWKFSYESNVANNKIHEATEPWNLVKKMKRL
           +     +  +   +G  G +GY+PLL+L       FV    GLA+ +FSY       K  E    WNL+++MKRL
Subjt:  HKSLDIPLWEIGFYPTIGPMGGIGYSPLLIL-------FV---CGLADWKFSYESNVANNKIHEATEPWNLVKKMKRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGATTTTTAGATCGCTAAATCATTGTGGAATTCAAGGTAGAGGAAAATTCTTCAGCTCTGCTCCTACGCTTTTTTTTTTTTTTTTTTTTGATTTCTACATCTA
AGGTATCTTAATAATTTTGGATACTCTCAGATAAAATTCAGTAGCCCGTGGAATAATGCAAGAAACACTATCAAATAATTCAATAGTGCACACTAGAATCCAAGTGCTCC
AGAATTTGGAGTTTGGATGCGTTTTTCAACCATTTAACGGCAGTTGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCACTTGACATACCATTGTGGGAAATTGGC
TTTTATCCCACTATTGGGCCTATGGGAGGCATTGGTTACTCTCCTCTTTTAATACTATTTGTATGTGGGCTAGCGGATTGGAAATTCTCATATGAGTCAAATGTCGCAAA
TAACAAAATTCATGAAGCAACTGAGCCATGGAATTTAGTAAAGAAAATGAAGAGATTGCAACATTGTGAGAATTAAACTTAATACTATGTCTAAATCCTTAGTTCCAAGT
ATAGTATTGAAGAAAAATCATCATGATCGAGAAACAGATTCGAAGTGGTTAAGACAAATGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTGAGAAAAGAAGTCAAGAG
ATGGGTCCAGCAAGCTGTTAGTGCTAAAAAAGATTTGAACAAGGAAAAACAAAGGTAGTTAGACCTGGAGAAGGATATCGAGTCTTTAAATATCAAGGTAATCTAAGTGA
GAGAAAAGAAATAGAGATTATTAAGGAACATTGCCGGCTTGCATGAAAGGACAAAGGCTAAAAAGGAATAGAATACATAATGATACTCAATAGGATTCAATTGAAAGATT
GGGTTGAAAATTTTGATATTTTTAGTGCTAAGAGTTCTTTTTTTTGTGGC
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGATTTTTAGATCGCTAAATCATTGTGGAATTCAAGGTAGAGGAAAATTCTTCAGCTCTGCTCCTACGCTTTTTTTTTTTTTTTTTTTTGATTTCTACATCTA
AGGTATCTTAATAATTTTGGATACTCTCAGATAAAATTCAGTAGCCCGTGGAATAATGCAAGAAACACTATCAAATAATTCAATAGTGCACACTAGAATCCAAGTGCTCC
AGAATTTGGAGTTTGGATGCGTTTTTCAACCATTTAACGGCAGTTGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCACTTGACATACCATTGTGGGAAATTGGC
TTTTATCCCACTATTGGGCCTATGGGAGGCATTGGTTACTCTCCTCTTTTAATACTATTTGTATGTGGGCTAGCGGATTGGAAATTCTCATATGAGTCAAATGTCGCAAA
TAACAAAATTCATGAAGCAACTGAGCCATGGAATTTAGTAAAGAAAATGAAGAGATTGCAACATTGTGAGAATTAAACTTAATACTATGTCTAAATCCTTAGTTCCAAGT
ATAGTATTGAAGAAAAATCATCATGATCGAGAAACAGATTCGAAGTGGTTAAGACAAATGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTGAGAAAAGAAGTCAAGAG
ATGGGTCCAGCAAGCTGTTAGTGCTAAAAAAGATTTGAACAAGGAAAAACAAAGGTAGTTAGACCTGGAGAAGGATATCGAGTCTTTAAATATCAAGGTAATCTAAGTGA
GAGAAAAGAAATAGAGATTATTAAGGAACATTGCCGGCTTGCATGAAAGGACAAAGGCTAAAAAGGAATAGAATACATAATGATACTCAATAGGATTCAATTGAAAGATT
GGGTTGAAAATTTTGATATTTTTAGTGCTAAGAGTTCTTTTTTTTGTGGC
Protein sequenceShow/hide protein sequence
MTEIFRSLNHCGIQGRGKFFSSAPTLFFFFFFDFYIGILIILDTLR*NSVARGIMQETLSNNSIVHTRIQVLQNLEFGCVFQPFNGSSSLESSLGAHKSLDIPLWEIGFY
PTIGPMGGIGYSPLLILFVCGLADWKFSYESNVANNKIHEATEPWNLVKKMKRLQHCENT*YYV*ILSSKYSIEEKSSSRNRFEVVKTNELCFGNRERKVEKRSQEMGPA
SC*C*KRFEQGKTKVVRPGEGYRVFKYQGNLSERKEIEIIKEHCRLAKDKG*KGIEYIMILNRIQLKDWVENFDIFSAKSSFFCG