; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G041040 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041040
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchrH02:20495955..20496944
RNA-Seq ExpressionChy2G041040
SyntenyChy2G041040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045607.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.24e-2865.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.10e-2768.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SW++VSQWS+ FQL+S + WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]3.84e-2970.73Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SWK+VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TYK02649.1 hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]1.04e-2865.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TYK28912.1 hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]1.82e-2865.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YA EV  QLIPN+  W++VSQWS+ FQLES   WPKKLEV LPKTC+L F+NNNL+ELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase9.8e-2468.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV A LIPN+ SW++VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R KF K YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7TUU7 Glial fibrillary acidic protein-like3.7e-2365.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7TXA1 Glial fibrillary acidic protein-like1.5e-2468.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SW++VSQWS+ FQL+S + WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7VHI3 Uncharacterized protein2.3e-2570.73Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SWK+VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5D3BWX8 Uncharacterized protein3.7e-2365.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATATTTACGCGTTTGAGGTATTTGCCCAATTGATTCCTAATGACGTCTCATGGAAAGACGTATCTCAGTGGTCGAAACAATTTCAACTAGAGTCAAAGACTGT
TTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTAAGCTTATATTTGTCAACAATAACCTAGAAGAGTTAAAAGGTTTGTGGGAAAGCTTAACGTCAAAGCATA
GAACAAAGTTTACAAAAGTATATGGGAAACATAGGTGACCTCCTATACACAACTGTTAATACATCCACATTGCAGGCTTTGTCAAACTTCTGGGACTCTACGTCAAAGTG
TTTCACGTTGAACATGTTTGACTTAACTCCAACTATAGAAGAATATAAAGCACTTTTTAGCTTACCAGTTGACATAGGAAATAAGATTTATATTTTTTTATCGAAAGTTG
AATCTACAACGTTCACTATCAAAGTTTATAGGTGACATTCATGTGTCTGAGATAAAGGAACAGATAAAGACAAAAGAAGGTAGAAATTGTATTCCCATCAATTTTCTCAT
CAACCTTGCATGTGGTTGTCTATCAGGGAAGAAGGATTTGTCTCTTATTGCATTATGTATCTACAAAACAATTATTTTTCCCAGGATTAAAGGAAATGTAGAAGAAGAGG
TGCTTAAGATTTTTGTTGGAATAAAACGAGGAGTAAACCCTATTATCCCAATCATGACAGAGATTTTTAGATCGCTAAATCATTGTGGAATTCAAGGTAGAGGAAAATTC
TTCAGCTCTGCTCCTACGCTTTTTTTTTTTTTTTTTTTTGATTTCTACATCTAAGGTATCTTAATAATTTTGGATACTCTCAGATAAAATTCAGTAGCCCGTGGAATAAT
GCAAGAAACACTATCAAATAATTCAATAGTGCACACTAGAATCCAAGTGCTCCAGAATTTGGAGTTTGGATGCGTTTTTCAACCATTTAACGGCAGTTGAAGTAGTCTGG
mRNA sequenceShow/hide mRNA sequence
ATGATAGATATTTACGCGTTTGAGGTATTTGCCCAATTGATTCCTAATGACGTCTCATGGAAAGACGTATCTCAGTGGTCGAAACAATTTCAACTAGAGTCAAAGACTGT
TTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTAAGCTTATATTTGTCAACAATAACCTAGAAGAGTTAAAAGGTTTGTGGGAAAGCTTAACGTCAAAGCATA
GAACAAAGTTTACAAAAGTATATGGGAAACATAGGTGACCTCCTATACACAACTGTTAATACATCCACATTGCAGGCTTTGTCAAACTTCTGGGACTCTACGTCAAAGTG
TTTCACGTTGAACATGTTTGACTTAACTCCAACTATAGAAGAATATAAAGCACTTTTTAGCTTACCAGTTGACATAGGAAATAAGATTTATATTTTTTTATCGAAAGTTG
AATCTACAACGTTCACTATCAAAGTTTATAGGTGACATTCATGTGTCTGAGATAAAGGAACAGATAAAGACAAAAGAAGGTAGAAATTGTATTCCCATCAATTTTCTCAT
CAACCTTGCATGTGGTTGTCTATCAGGGAAGAAGGATTTGTCTCTTATTGCATTATGTATCTACAAAACAATTATTTTTCCCAGGATTAAAGGAAATGTAGAAGAAGAGG
TGCTTAAGATTTTTGTTGGAATAAAACGAGGAGTAAACCCTATTATCCCAATCATGACAGAGATTTTTAGATCGCTAAATCATTGTGGAATTCAAGGTAGAGGAAAATTC
TTCAGCTCTGCTCCTACGCTTTTTTTTTTTTTTTTTTTTGATTTCTACATCTAAGGTATCTTAATAATTTTGGATACTCTCAGATAAAATTCAGTAGCCCGTGGAATAAT
GCAAGAAACACTATCAAATAATTCAATAGTGCACACTAGAATCCAAGTGCTCCAGAATTTGGAGTTTGGATGCGTTTTTCAACCATTTAACGGCAGTTGAAGTAGTCTGG
Protein sequenceShow/hide protein sequence
MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYGKHRPPIHNC*YIHIAGFVKLLGLYVKVF
HVEHV*LNSNYRRISTF*LTS*HRK*DLYFFIES*IYNVHYQSL*VTFMCLR*RNR*RQKKVEIVFPSIFSSTLHVVVYQGRRICLLLHYVSTKQLFFPGLKEMKKRCLR
FLLE*NEE*TLLSQS*QRFLDRIIVEFKVEENSSALLLRFFFFFFLISTSKVS**FWILSDKIQ*PVE*CKKHYQIIQCTLESKCSRIWSLDAFFNHLTAVEVVW