; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G041050 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041050
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchrH02:20496687..20505238
RNA-Seq ExpressionChy2G041050
SyntenyChy2G041050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045607.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.25e-3165.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.41e-3168.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SW++VSQWS+ FQL+S + WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]2.11e-3270.73Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SWK+VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TYK02649.1 hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]7.09e-3265.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TYK28912.1 hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]1.27e-3165.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YA EV  QLIPN+  W++VSQWS+ FQLES   WPKKLEV LPKTC+L F+NNNL+ELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase3.6e-2468.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV A LIPN+ SW++VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R KF K YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7TUU7 Glial fibrillary acidic protein-like1.3e-2365.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7TXA1 Glial fibrillary acidic protein-like5.5e-2568.29Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SW++VSQWS+ FQL+S + WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5A7VHI3 Uncharacterized protein8.5e-2670.73Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D +A EV AQLIPN+ SWK+VSQWS+ FQLES   WPKKLEVPLPKTC+L F+NNNLEELK LWESL  + R +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

A0A5D3BWX8 Uncharacterized protein1.3e-2365.85Show/hide
Query:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG
        M+D YAFE   QLIPN+  W++VSQWS+ FQLES   W KKLEV LPKTC+L F+NNNLEELK LWE+L  +HR +FTK YG
Subjt:  MIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGCAACAAAATGATGATAGATATTTACGCGTTTGAGGTATTTGCCCAATTGATTCCTAATGACGTCTCATGGAAAGACGTATCTCAGTGGTCGAAACAATTTCA
ACTAGAGTCAAAGACTGTTTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTAAGCTTATATTTGTCAACAATAACCTAGAAGAGTTAAAAGGTTTGTGGGAAA
GCTTAACGTCAAAGCATAGAACAAAGTTTACAAAAGTATATGGGAAACATAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGCAACAAAATGATGATAGATATTTACGCGTTTGAGGTATTTGCCCAATTGATTCCTAATGACGTCTCATGGAAAGACGTATCTCAGTGGTCGAAACAATTTCA
ACTAGAGTCAAAGACTGTTTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTAAGCTTATATTTGTCAACAATAACCTAGAAGAGTTAAAAGGTTTGTGGGAAA
GCTTAACGTCAAAGCATAGAACAAAGTTTACAAAAGTATATGGGAAACATAGGTGA
Protein sequenceShow/hide protein sequence
MECNKMMIDIYAFEVFAQLIPNDVSWKDVSQWSKQFQLESKTVWPKKLEVPLPKTCKLIFVNNNLEELKGLWESLTSKHRTKFTKVYGKHR