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Chy2G041310 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041310
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionReverse transcriptase
Genome locationchrH02:21082729..21085032
RNA-Seq ExpressionChy2G041310
SyntenyChy2G041310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032897.1 reverse transcriptase [Cucumis melo var. makuwa]1.08e-0762.96Show/hide
Query:  SSRVEGFIKEFD-------HLIYDRQEASRAHKQESRLGGGSNSSLSGGEEEEE
        S  +E  +K+F         LIYDR+EASRAHK ESR GGG NSSLSGGEEEEE
Subjt:  SSRVEGFIKEFD-------HLIYDRQEASRAHKQESRLGGGSNSSLSGGEEEEE
TrEMBL top hitse value%identityAlignment
A0A5A7SU91 Reverse transcriptase3.6e-0562.96Show/hide
Query:  SSRVEGFIKEFD-------HLIYDRQEASRAHKQESRLGGGSNSSLSGGEEEEE
        S  +E  +K+F         LIYDR+EASRAHK ESR GGG NSSLSGGEEEEE
Subjt:  SSRVEGFIKEFD-------HLIYDRQEASRAHKQESRLGGGSNSSLSGGEEEEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATTCGTGTGAATGGGGATATGGGAATACAGTATAAGCATCGGGTGGATGGAGCGAGACAAGAGGATTCCACTCTTCGGGAACAAAGAAATGTTGAGCTTGAGGA
AATAGGGGAGGGATCTTATGTAGCATCTTATCTTTCGTTCGTCGTTGCGGCGAGACCAATACCAGAAGCTGCCGATCTTCGTCTTGCTTTCTCATTCTTCAATTGGGATG
AGACAAAGTATTTGATTCATATAAGAAAAGAAGAAGAAAGGAAGCGCTTTCCCGAGCAGACGAGGTTTAGGAGTCTGCATCCCAAGTCAGAGGCTTTCCCGAGTTCACGA
GTGGAAGGATTCATCAAGGAGTTCGATCACCTTATCTACGATCGACAGGAGGCAAGCCGAGCTCATAAGCAAGAATCAAGGCTTGGTGGCGGCTCGAACTCATCCCTTTC
AGGAGGGGAGGAGGAAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATTCGTGTGAATGGGGATATGGGAATACAGTATAAGCATCGGGTGGATGGAGCGAGACAAGAGGATTCCACTCTTCGGGAACAAAGAAATGTTGAGCTTGAGGA
AATAGGGGAGGGATCTTATGTAGCATCTTATCTTTCGTTCGTCGTTGCGGCGAGACCAATACCAGAAGCTGCCGATCTTCGTCTTGCTTTCTCATTCTTCAATTGGGATG
AGACAAAGTATTTGATTCATATAAGAAAAGAAGAAGAAAGGAAGCGCTTTCCCGAGCAGACGAGGTTTAGGAGTCTGCATCCCAAGTCAGAGGCTTTCCCGAGTTCACGA
GTGGAAGGATTCATCAAGGAGTTCGATCACCTTATCTACGATCGACAGGAGGCAAGCCGAGCTCATAAGCAAGAATCAAGGCTTGGTGGCGGCTCGAACTCATCCCTTTC
AGGAGGGGAGGAGGAAGAAGAATGA
Protein sequenceShow/hide protein sequence
MPIRVNGDMGIQYKHRVDGARQEDSTLREQRNVELEEIGEGSYVASYLSFVVAARPIPEAADLRLAFSFFNWDETKYLIHIRKEEERKRFPEQTRFRSLHPKSEAFPSSR
VEGFIKEFDHLIYDRQEASRAHKQESRLGGGSNSSLSGGEEEEE