; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G041330 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041330
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box domain-containing protein
Genome locationchrH02:21181202..21181669
RNA-Seq ExpressionChy2G041330
SyntenyChy2G041330
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652960.1 hypothetical protein Csa_017728 [Cucumis sativus]1.46e-5060.23Show/hide
Query:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------
        NAGDILFDVLS L TKTLLEMRFV K WHRLILDRSFVQAQFQK GL LSGFMFQEKY+KC  DI TFTY+P+DA+SK + +++                
Subjt:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------

Query:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                         TIYVCN LFKKW SFEVAQLD  S IAL FD IL         KVVRIQQLENE
Subjt:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

XP_004146726.3 F-box protein At5g07610 [Cucumis sativus]1.49e-5060.23Show/hide
Query:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------
        NAGDILFDVLS L TKTLLEMRFV K WHRLILDRSFVQAQFQK GL LSGFMFQEKY+KC  DI TFTY+P+DA+SK + +++                
Subjt:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------

Query:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                         TIYVCN LFKKW SFEVAQLD  S IAL FD IL         KVVRIQQLENE
Subjt:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

XP_008444037.1 PREDICTED: F-box protein At5g07610-like [Cucumis melo]1.94e-5363.1Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA--------------
        MNAGDILFDVLS L TKTLLEMR V K W RLILD  FVQAQFQKSGL LSGFMFQEKYQKCLDDIKTFTY+P+DA+SK + +++               
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA--------------

Query:  --------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                      TIYVCN LFKKW SFEVAQLDR S+IAL FD IL         KVVRIQQLENE
Subjt:  --------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

XP_031739519.1 F-box protein At5g07610-like [Cucumis sativus]1.79e-5060.23Show/hide
Query:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------
        NAGDILFDVLS L TKTLLEMRFV K WHRLILDRSFVQAQFQK GL LSGFMFQEKY+KC  DI TFTY+P+DA+SK + +++                
Subjt:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLYA---------------

Query:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                         TIYVCN LFKKW SFEVAQLD  S IAL FD IL         KVVRIQQLENE
Subjt:  -----------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

XP_038880354.1 F-box protein At5g49610-like [Benincasa hispida]9.83e-5060.12Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYA----
        MNAGDI FDVLS L TK+LL+MRFV K WH+LI DR FVQAQ QK+GLTLSGF+FQEKYQKCLDDIKTF+Y+PV+AESK           ++++ A    
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYA----

Query:  --------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                      TIYVCN LFKKW SFEVAQLDR S+ AL FD IL         K+VRIQQLENE
Subjt:  --------------TIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

TrEMBL top hitse value%identityAlignment
A0A0A0LW82 F-box domain-containing protein4.6e-4160.23Show/hide
Query:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY----------------
        NAGDILFDVLS L TKTLLEMRFV K WHRLILDRSFVQAQFQK GL LSGFMFQEKY+KC  DI TFTY+P+DA+SK + +++                
Subjt:  NAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY----------------

Query:  ----------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                         TIYVCN LFKKW SFEVAQLD  S IAL FD IL         KVVRIQQLENE
Subjt:  ----------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

A0A1S3B902 F-box protein At5g07610-like2.9e-4363.1Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY---------------
        MNAGDILFDVLS L TKTLLEMR V K W RLILD  FVQAQFQKSGL LSGFMFQEKYQKCLDDIKTFTY+P+DA+SK + +++               
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY---------------

Query:  -------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                      TIYVCN LFKKW SFEVAQLDR S+IAL FD IL         KVVRIQQLENE
Subjt:  -------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

A0A5D3BX11 F-box protein2.9e-4363.1Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY---------------
        MNAGDILFDVLS L TKTLLEMR V K W RLILD  FVQAQFQKSGL LSGFMFQEKYQKCLDDIKTFTY+P+DA+SK + +++               
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-ELLLY---------------

Query:  -------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                      TIYVCN LFKKW SFEVAQLDR S+IAL FD IL         KVVRIQQLENE
Subjt:  -------------ATIYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

A0A6J1E4Z3 putative F-box protein At3g239506.6e-4058.93Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYAT---
        MN GDI FDVLS L TKTL+EMR V K WH LI DRSFVQAQFQK+GLTLSGF+FQEKYQKCLDDIKTF+Y+PV+A+SK           ++++ A+   
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYAT---

Query:  ---------------IYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                       IYVCN LF+KW SFEVAQLDR S+IAL FD IL         ++VRIQQLENE
Subjt:  ---------------IYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

A0A6J1JLZ6 putative F-box protein At3g239501.5e-3957.74Show/hide
Query:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYAT---
        MN GDI FDVLS L TKTL+EMR V K WH LI DRSFVQAQFQK+GLTLSGF+FQEKYQKCLDDIKTF+Y+PV+A+SK           ++++ A+   
Subjt:  MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESK-----------ELLLYAT---

Query:  ---------------IYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE
                       IYVCN LF+KW SFEVAQLDR S+I L FD IL         +++RIQQLENE
Subjt:  ---------------IYVCNSLFKKWASFEVAQLDRLSHIALPFDLIL---------KVVRIQQLENE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTGGTGATATTCTCTTTGATGTTTTATCTTGGTTGGCAACGAAGACTCTTCTTGAAATGAGATTTGTATTTAAGGTGTGGCATCGACTTATTTTAGACCGATC
ATTTGTACAAGCTCAATTTCAGAAGAGTGGATTGACGTTATCAGGTTTCATGTTTCAGGAAAAATACCAAAAGTGTCTTGATGATATAAAAACATTCACCTATGTGCCCG
TAGATGCAGAATCTAAGGAGTTGCTTCTGTACGCAACAATCTACGTCTGCAATTCCTTGTTTAAGAAGTGGGCGAGTTTTGAAGTGGCTCAGTTGGACAGACTCAGCCAC
ATTGCTCTACCATTTGATCTCATACTGAAAGTAGTTAGAATACAGCAGTTGGAGAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTGGTGATATTCTCTTTGATGTTTTATCTTGGTTGGCAACGAAGACTCTTCTTGAAATGAGATTTGTATTTAAGGTGTGGCATCGACTTATTTTAGACCGATC
ATTTGTACAAGCTCAATTTCAGAAGAGTGGATTGACGTTATCAGGTTTCATGTTTCAGGAAAAATACCAAAAGTGTCTTGATGATATAAAAACATTCACCTATGTGCCCG
TAGATGCAGAATCTAAGGAGTTGCTTCTGTACGCAACAATCTACGTCTGCAATTCCTTGTTTAAGAAGTGGGCGAGTTTTGAAGTGGCTCAGTTGGACAGACTCAGCCAC
ATTGCTCTACCATTTGATCTCATACTGAAAGTAGTTAGAATACAGCAGTTGGAGAATGAGTAG
Protein sequenceShow/hide protein sequence
MNAGDILFDVLSWLATKTLLEMRFVFKVWHRLILDRSFVQAQFQKSGLTLSGFMFQEKYQKCLDDIKTFTYVPVDAESKELLLYATIYVCNSLFKKWASFEVAQLDRLSH
IALPFDLILKVVRIQQLENE