; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G041380 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041380
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFlocculation protein FLO11-like
Genome locationchrH02:21288538..21289304
RNA-Seq ExpressionChy2G041380
SyntenyChy2G041380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032272.1 uncharacterized protein E6C27_scaffold219G001100 [Cucumis melo var. makuwa]3.22e-0536Show/hide
Query:  SLHE----ASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVSLPKKPNSIKCLVLN
        S+HE    ASS  T++PP  P  V+   + P   F     S  RR R  +SDS S+E +  +S+S+ +DNVVLS+VLKRKAS+   + K+  S+  L   
Subjt:  SLHE----ASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVSLPKKPNSIKCLVLN

Query:  TSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAP
             SSNA +      E+LF         + S GH  SS++      AP
Subjt:  TSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAP

KAA0043039.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]4.42e-0833.9Show/hide
Query:  RPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVS--------LPKKPN---------------
        +PP+SP K S        +F  +  S  RRS   +SD   +ET+VV+S  +++DNVVLSDV+K K S+  S        L K P                
Subjt:  RPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVS--------LPKKPN---------------

Query:  ---------SIKCLVLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSIL
                 S  C   NTSA  SS    S D TI+DLFTKF      L+S    H      +  S P P FT++  L
Subjt:  ---------SIKCLVLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSIL

KAA0051667.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]9.42e-1036.41Show/hide
Query:  MISACNPLRRPHRISEIP-KSSSFESSHSLHEASSVI----TSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVV
        MI A +P  R    SEIP  SSS ESS SLH  S       TS+ P  P+  +     P  +F  S  SS R+ R  + DS S+ETIVVDS+S  EDNVV
Subjt:  MISACNPLRRPHRISEIP-KSSSFESSHSLHEASSVI----TSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVV

Query:  LSDVLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSS
        LS VLKRKA+        +    PKKP + +   +          P+SS+   S                   D TI++LF KF   P + DS    HS+
Subjt:  LSDVLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSS

Query:  SANTATESAPHPGFTST
              E AP   FT++
Subjt:  SANTATESAPHPGFTST

KGN44137.1 hypothetical protein Csa_015624 [Cucumis sativus]1.61e-1952.53Show/hide
Query:  VLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSILNPAHISDEHNNPGTKQIATKLVLGSSPGPLKFKARV
        V  T A  SS+A++S DT I++LF +FA DP+VL    H HSS A++A ESAPHP FTSTSI  P  + DE+   G K  A +LV   S GPLKF+A V
Subjt:  VLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSILNPAHISDEHNNPGTKQIATKLVLGSSPGPLKFKARV

TYJ97943.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]9.34e-1036.41Show/hide
Query:  MISACNPLRRPHRISEIP-KSSSFESSHSLHEASSVI----TSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVV
        MI A +P  R    SEIP  SSS ESS SLH  S       TS+ P  P+  +     P  +F  S  SS R+ R  + DS S+ETIVVDS+S  EDNVV
Subjt:  MISACNPLRRPHRISEIP-KSSSFESSHSLHEASSVI----TSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVV

Query:  LSDVLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSS
        LS VLKRKA+        +    PKKP + +   +          P+SS+   S                   D TI++LF KF   P + DS    HS+
Subjt:  LSDVLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSS

Query:  SANTATESAPHPGFTST
              E AP   FT++
Subjt:  SANTATESAPHPGFTST

TrEMBL top hitse value%identityAlignment
A0A0A0K752 Uncharacterized protein2.5e-1552.53Show/hide
Query:  VLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSILNPAHISDEHNNPGTKQIATKLVLGSSPGPLKFKARV
        V  T A  SS+A++S DT I++LF +FA DP+VL    H HSS A++A ESAPHP FTSTSI  P  + DE+   G K  A +LV   S GPLKF+A V
Subjt:  VLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSILNPAHISDEHNNPGTKQIATKLVLGSSPGPLKFKARV

A0A5A7TP88 Flocculation protein FLO11-like2.1e-0633.9Show/hide
Query:  RPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVS--------LPKKPN---------------
        +PP+SP K S        +F  +  S  RRS   +SD   +ET+VV+S  +++DNVVLSDV+K K S+  S        L K P                
Subjt:  RPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVS--------LPKKPN---------------

Query:  ---------SIKCLVLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSIL
                 S  C   NTSA  SS    S D TI+DLFTKF      L+S    H      +  S P P FT++  L
Subjt:  ---------SIKCLVLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSIL

A0A5A7UBA4 Flocculation protein FLO11-like3.0e-0835.35Show/hide
Query:  MISACNPLRRPHRISEIP-KSSSFESSHSLH-EASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSD
        MI A +P  R    SEIP  SSS ESS SLH E+ +        +P K +    F +     S  SS R+ R  + DS S+ETIVVDS+S  EDNVVLS 
Subjt:  MISACNPLRRPHRISEIP-KSSSFESSHSLH-EASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSD

Query:  VLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSSSAN
        VLKRKA+        +    PKKP + +   +          P+SS+   S                   D TI++LF KF   P + DS    HS+   
Subjt:  VLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSSSAN

Query:  TATESAPHPGFTSTS
           E AP   FT+++
Subjt:  TATESAPHPGFTSTS

A0A5D3BFA1 Flocculation protein FLO11-like3.0e-0835.35Show/hide
Query:  MISACNPLRRPHRISEIP-KSSSFESSHSLH-EASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSD
        MI A +P  R    SEIP  SSS ESS SLH E+ +        +P K +    F +     S  SS R+ R  + DS S+ETIVVDS+S  EDNVVLS 
Subjt:  MISACNPLRRPHRISEIP-KSSSFESSHSLH-EASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSD

Query:  VLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSSSAN
        VLKRKA+        +    PKKP + +   +          P+SS+   S                   D TI++LF KF   P + DS    HS+   
Subjt:  VLKRKAS--------NNVSLPKKPNSIKCLVLNT------SAPVSSNAQKS------------------IDTTIEDLFTKFAWDPKVLDSGGHPHSSSAN

Query:  TATESAPHPGFTSTS
           E AP   FT+++
Subjt:  TATESAPHPGFTSTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCGGCTTGCAATCCTTTGAGAAGACCGCACAGAATTAGTGAGATTCCAAAATCTTCATCCTTTGAGTCTTCTCACTCTTTGCATGAAGCTTCTTCGGTTATCAC
TTCTCGTCCTCCTAGCTCTCCGAGCAAGGTATCAGGCAAGGGTACTTTTCCTATCAAAGCTTTTGTGGCTTCTCGTGCATCATCATCTCGACGCTCTAGATTTAATGTTT
CTGACTCTGCATCTGTTGAGACAATTGTTGTTGATTCCGACTCCACTAGTGAAGACAATGTGGTTCTCTCTGATGTTTTGAAGAGGAAAGCATCTAACAATGTTTCTCTT
CCCAAGAAGCCAAATTCTATAAAATGTCTAGTTTTGAATACTTCTGCTCCTGTCTCATCCAATGCTCAGAAATCTATTGATACCACTATTGAGGACTTGTTCACAAAATT
TGCTTGGGACCCTAAGGTTCTAGACTCTGGTGGTCACCCACACTCATCTTCTGCTAACACCGCTACTGAATCGGCTCCACATCCTGGTTTCACATCTACCTCTATACTTA
ATCCTGCACATATTAGTGATGAGCACAACAATCCGGGAACTAAACAAATTGCTACCAAGTTAGTTCTTGGTTCCTCCCCTGGTCCTTTAAAGTTTAAGGCTCGTGTCCCT
TTTTGTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCGGCTTGCAATCCTTTGAGAAGACCGCACAGAATTAGTGAGATTCCAAAATCTTCATCCTTTGAGTCTTCTCACTCTTTGCATGAAGCTTCTTCGGTTATCAC
TTCTCGTCCTCCTAGCTCTCCGAGCAAGGTATCAGGCAAGGGTACTTTTCCTATCAAAGCTTTTGTGGCTTCTCGTGCATCATCATCTCGACGCTCTAGATTTAATGTTT
CTGACTCTGCATCTGTTGAGACAATTGTTGTTGATTCCGACTCCACTAGTGAAGACAATGTGGTTCTCTCTGATGTTTTGAAGAGGAAAGCATCTAACAATGTTTCTCTT
CCCAAGAAGCCAAATTCTATAAAATGTCTAGTTTTGAATACTTCTGCTCCTGTCTCATCCAATGCTCAGAAATCTATTGATACCACTATTGAGGACTTGTTCACAAAATT
TGCTTGGGACCCTAAGGTTCTAGACTCTGGTGGTCACCCACACTCATCTTCTGCTAACACCGCTACTGAATCGGCTCCACATCCTGGTTTCACATCTACCTCTATACTTA
ATCCTGCACATATTAGTGATGAGCACAACAATCCGGGAACTAAACAAATTGCTACCAAGTTAGTTCTTGGTTCCTCCCCTGGTCCTTTAAAGTTTAAGGCTCGTGTCCCT
TTTTGTGGGTAA
Protein sequenceShow/hide protein sequence
MISACNPLRRPHRISEIPKSSSFESSHSLHEASSVITSRPPSSPSKVSGKGTFPIKAFVASRASSSRRSRFNVSDSASVETIVVDSDSTSEDNVVLSDVLKRKASNNVSL
PKKPNSIKCLVLNTSAPVSSNAQKSIDTTIEDLFTKFAWDPKVLDSGGHPHSSSANTATESAPHPGFTSTSILNPAHISDEHNNPGTKQIATKLVLGSSPGPLKFKARVP
FCG