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Chy2G041650 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G041650
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchrH02:21932425..21950856
RNA-Seq ExpressionChy2G041650
SyntenyChy2G041650
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032561.1 transposase [Cucumis melo var. makuwa]1.39e-0672.73Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMNSDRFEVL R+ RDI AIP+ T+A E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
KAA0044877.1 transposase [Cucumis melo var. makuwa]6.66e-0758.82Show/hide
Query:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        D YL   N   E      IL WWKMNSDRFEVL ++ RDILAIP+ TVA E
Subjt:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
KAA0048472.1 transposase [Cucumis melo var. makuwa]1.52e-0658.82Show/hide
Query:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        D YL   N   E      IL WWKMNSDRFEVL ++ RDILAIP+ TVA E
Subjt:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
KAA0051170.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.33e-0760.78Show/hide
Query:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        D YL   N   E      IL WWKMNSDRFEVL ++ RDILAIP+FTVA E
Subjt:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
TYK14635.1 transposase [Cucumis melo var. makuwa]5.65e-0756.86Show/hide
Query:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        D YL   N   E      IL WWKMN DRFEVL  + RDIL IP+ TVAPE
Subjt:  D*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
TrEMBL top hitse value%identityAlignment
A0A5A7TXF5 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.9e-0575.76Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMN+DRFEVL ++ RDILAIP+FTVA E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
A0A5A7U7I9 Zinc finger BED domain-containing protein RICESLEEPER 3-like8.4e-0678.79Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMNSDRFEVL ++ RDILAIP+FTVA E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
A0A5A7USY1 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.4e-0578.79Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMNSDRFEVL ++ RDILAIPI TVA E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
A0A5D3BVD4 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.4e-0575.76Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMNSDRFEVL  + RDILAIP++TVA E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
A0A5D3DXX1 Transposase7.1e-0575.76Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
        IL WWKMNSDRFEVL ++ RDILAIP+ TVA E
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain5.9e-0445.95Show/hide
Query:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPEWRTC
        +L WWK+NS R+  LS + RD LA+   + APE   C
Subjt:  IL*WWKMNSDRFEVLSRIVRDILAIPIFTVAPEWRTC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGGTCTTGAAAATCATCGTTTAGGATAAGAGGAAAAATTGCTTTAGATTGATATATAGAGAAATTGTTTAACTCTTGTATTAAGGACGAATGTAAACGTTCTA
GTGTTACAAGTTGAGGCGTGAAGATTTTGTCTATGACATGATTATTGAGGAATTTGAAGGTGATGTGACTACGACACCTTTTGAATATGGTTCATCAGAGATTGA
TATTTATTTGTTGGAAACCAATGTTAGGAACGAAGGTGATTTTGACATATACTATAGTGGTGGAAGATGAACAGTGATCGATTTGAGGTTCTTAGTCGTATAGTT
AGAGATATTTTGGCTATTCCAATTTTTACTGTAGCGCCTGAGTGGAGGACATGTTGATTCATGACATTGCTCATTGGCTCCTAAAACAGTGGAGACTCTCATATG
TACTCAAAATTGGATAAATTCTAATCCAATAGATCTTCAAGTTCAACATGAATTGGAAGATGCTTTAAAATTTGACGAAGGATTCCGAGTGGTTATGGATAATGA
AAAAGATCTTGAAGATCTTTCCGATTATGCAAAATTGTCAATTACTGACTACTTACTAATGTTGACCAAAACTTTTAATGTTTGTATCGTAGTGTTTGATACTTT
GGTTGTATTTGTGACAACTGACTAATATTGACCAAGACCTGTAAGTTGAATTGAAGCTGGG
mRNA sequenceShow/hide mRNA sequence
GCAGGTCTTGAAAATCATCGTTTAGGATAAGAGGAAAAATTGCTTTAGATTGATATATAGAGAAATTGTTTAACTCTTGTATTAAGGACGAATGTAAACGTTCTA
GTGTTACAAGTTGAGGCGTGAAGATTTTGTCTATGACATGATTATTGAGGAATTTGAAGGTGATGTGACTACGACACCTTTTGAATATGGTTCATCAGAGATTGA
TATTTATTTGTTGGAAACCAATGTTAGGAACGAAGGTGATTTTGACATATACTATAGTGGTGGAAGATGAACAGTGATCGATTTGAGGTTCTTAGTCGTATAGTT
AGAGATATTTTGGCTATTCCAATTTTTACTGTAGCGCCTGAGTGGAGGACATGTTGATTCATGACATTGCTCATTGGCTCCTAAAACAGTGGAGACTCTCATATG
TACTCAAAATTGGATAAATTCTAATCCAATAGATCTTCAAGTTCAACATGAATTGGAAGATGCTTTAAAATTTGACGAAGGATTCCGAGTGGTTATGGATAATGA
AAAAGATCTTGAAGATCTTTCCGATTATGCAAAATTGTCAATTACTGACTACTTACTAATGTTGACCAAAACTTTTAATGTTTGTATCGTAGTGTTTGATACTTT
GGTTGTATTTGTGACAACTGACTAATATTGACCAAGACCTGTAAGTTGAATTGAAGCTGGG
Protein sequenceShow/hide protein sequence
AGLENHRLGEEKLL*IDI*RNCLTLVLRTNVNVLVLQVEA*RFCL*HDY*GI*R*CDYDTFIWFIRD*YLFVGNQC*ERR*F*HIL*WWKMNSDRFEVLSRIVRD
ILAIPIFTVAPEWRTCFMTLLIGS*NSGDSHMYSKLDKF*SNRSSSST*IGRCFKI*RRIPSGYG**KRS*RSFRLCKIVNYLLTNVDQNF*CLYRSV*YFGCIC
DN*LILTKTCKLN*SWX