CuGenDBv2

Gene ID	Chy2G042280
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	PMD domain-containing protein
Genome location	chrH02:23288007..23289414
RNA-Seq Expression	Chy2G042280
Synteny	Chy2G042280
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]

4.50e-156

52.95

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ
        M GELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S
        + K          P   K+Q+ EW SRE+MLF E  I+DDLKD T LA  L                C L         C   F Q  S+++   F   S
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S

Query:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARI
        L  + T             HGL L                 H +  WL      H  LPT  R  +    S +G       SIYF EYEARELIHNGARI
Subjt:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARI

Query:  QWHTSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLS
        QWH +L N++KHERM +THDSSFLQ SY  SMCS Y+SS C N  I+TSYSPY+F  QFGFYQD+ NDIG MP AI+L+NIL+HWR+C RRNTLSELYL 
Subjt:  QWHTSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLS

Query:  ALSLDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSD
        A SL+PCKHVTQRF +WW TKH TYFEDN+HHLVSSAIPPP Q +LPKNRG N GGK+I LVEAM P LE+++ EHK+ESD+SKS+RHWKRPLKK +VS 
Subjt:  ALSLDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSD

Query:  DDSCGRGL
        D    RGL
Subjt:  DDSCGRGL

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]

1.04e-160

56.3

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ
        MAGELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S S+DKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF
        + K          P   K+Q+REW SRE+MLF E  IRDDLKD T   V   ++A  I S    +     +G  +   + +P  G+           +DF
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF

Query:  SRTHGLSLSHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSLPNQNKHERMTNTHDSSFLQTSYFASM
                 H +  WL      H  LPT  R  +    S +G       SIYF EYEARELIHNGARIQWH SL N++KHERM +THDSSFLQTSYF SM
Subjt:  SRTHGLSLSHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSLPNQNKHERMTNTHDSSFLQTSYFASM

Query:  CSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDPCKHVTQRFKNWWATKHETYFEDNKHH
         S Y+SS C N  I+TSYSPYRFG QFGFYQD+ NDIG M  AI+L+NIL+HWR+C RRNTLSELYL A SL+PCKHVTQRF +WW TKH TYFEDN+HH
Subjt:  CSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDPCKHVTQRFKNWWATKHETYFEDNKHH

Query:  LVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGRGL
        LVSSAIPP  QP+LPKNRGSN GGK+I LVEAM P LE+++ E K+ESD+SKS+RHWKRPLKK KVS D   GRGL
Subjt:  LVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGRGL

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]

1.37e-151

52.58

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ
        MAGELSISLWDLW F GLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S
        + K          P   K+Q REW SRE+MLF E  I+DDLKD T LA  L                C L         C   F Q  S+++   F   S
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S

Query:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT
        L  + T             HGL+L                 H +  WL      H  L T  R  +  +        SIYF EYEARELIHNGARIQWH 
Subjt:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT

Query:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL
        +L N++KHERM +THDSSFLQ SYF SM S Y+SS C N  I+TSYS YRFG QFGFYQD+ NDIG MP AI+L+NIL+H R+C R NTLSELYL A SL
Subjt:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL

Query:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC
        +PCKHVTQ+F +WW TKH TYFEDN+HHLV+S IP P QP+LPKNRGSN GGK+I LVEAM P LE+++ EHK+ES+NSKS+RHWKRPLKK KVS D   
Subjt:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC

Query:  GRGL
        GRGL
Subjt:  GRGL

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]

5.37e-154

53.27

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ
        MAGELSISLWDLWSF GLPIKG+FY++ IPS+KEL S SRDKTKCLP  CQY  Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF
        + K          P   K+Q+REW SRE+MLF E  IRDDLKD T LA  L                C L    +++    P  G  L    F   SL  
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF

Query:  SRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWH
        + T             HGL L                 H +  WL      H  LP   R  +    S +G       SIYF EYEARELIHNG RIQWH
Subjt:  SRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWH

Query:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS
         +L N+NKHERM +THDSSFLQ SYF SM S Y+SS C N  I+TSYSPYRFG QFGFYQD+ NDIG MP AI+L+NIL+HWR+C+RRNTLSELYL   S
Subjt:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS

Query:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS
        L+PCKHVTQRF +WW TKH  YFEDN+HHLVSSAIPPP QP+LPKNRGSN GGK+I LVEAM P LE ++ EH  ESD++KS+RHWKRPLKK KVS D  
Subjt:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS

Query:  CGRGL
         GRGL
Subjt:  CGRGL

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]

6.37e-138

49.11

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ
        MA ELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGATIS-LLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF
        + K          P   K+Q+REW SRE+MLF E  IRDDLKD T LA  L                C L    +++    P  G  L    F   SL  
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLDF

Query:  SRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWH
        + T             HGL L                 H +  WL      H  LP   R  +    S +G       SIYF +YEA ELIHNGARIQWH
Subjt:  SRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWH

Query:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS
         +L N+NKHERM +THDSSFLQ SYF                                  D+ NDIG MP AI+L+NIL+HWR+C+RRNTLSELYL A S
Subjt:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS

Query:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS
        L+PCKHVTQRF +WW TKH TYFEDN+HHLVSSAIPPP QP+LPKNRGSN GGK+I LVEAM P LE ++ EH  ESD++KS+RHWKRPLKK KVS D  
Subjt:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS

Query:  CGRGL
         GRGL
Subjt:  CGRGL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SHN8 PMD domain-containing protein

1.5e-131

52.98

Show/hide

Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGA-TISLLQ
        M GELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGA-TISLLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S
        + K          P   K+Q+ EW SRE+MLF E  I+DDLKD T LA  L                C L         C   F Q  S+++   F   S
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S

Query:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT
        L  + T             HGL L                 H +  WL      H  LPT  R  +  +        SIYF EYEARELIHNGARIQWH 
Subjt:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT

Query:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL
        +L N++KHERM +THDSSFLQ SY  SMCS Y+SS C N  I+TSYSPY+F  QFGFYQD+ NDIG MP AI+L+NIL+HWR+C RRNTLSELYL A SL
Subjt:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL

Query:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC
        +PCKHVTQRF +WW TKH TYFEDN+HHLVSSAIPPP Q +LPKNRG N GGK+I LVEAM P LE+++ EHK+ESD+SKS+RHWKRPLKK +VS D   
Subjt:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC

Query:  GRGL
         RGL
Subjt:  GRGL

A0A5A7TX42 Uncharacterized protein

3.0e-135

56.39

Show/hide

Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL
        MAGELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S S+DKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +   + F Y            
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL

Query:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLD
        ++ K          P   K+Q+REW SRE+MLF E  IRDDLKD T   V   ++A  I S    +     +G  +   + +P  G+           +D
Subjt:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLD

Query:  FSRTHGLSLSHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSLPNQNKHERMTNTHDSSFLQTSYFAS
        F         H +  WL      H  LPT  R  +    S +G       SIYF EYEARELIHNGARIQWH SL N++KHERM +THDSSFLQTSYF S
Subjt:  FSRTHGLSLSHALRPWLVSSLFWH-SLPTFERSSR----SQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSLPNQNKHERMTNTHDSSFLQTSYFAS

Query:  MCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDPCKHVTQRFKNWWATKHETYFEDNKH
        M S Y+SS C N  I+TSYSPYRFG QFGFYQD+ NDIG M  AI+L+NIL+HWR+C RRNTLSELYL A SL+PCKHVTQRF +WW TKH TYFEDN+H
Subjt:  MCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDPCKHVTQRFKNWWATKHETYFEDNKH

Query:  HLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGRGL
        HLVSSAIPP  QP+LPKNRGSN GGK+I LVEAM P LE+++ E K+ESD+SKS+RHWKRPLKK KVS D   GRGL
Subjt:  HLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGRGL

A0A5A7U8L3 PMD domain-containing protein

3.5e-128

52.58

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGA-TISLLQ
        MAGELSISLWDLW F GLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +     +   G  +      +
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLALGFHYDT*GPGA-TISLLQ

Query:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S
        + K          P   K+Q REW SRE+MLF E  I+DDLKD T LA  L                C L         C   F Q  S+++   F   S
Subjt:  EAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*S

Query:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT
        L  + T             HGL+L                 H +  WL      H  L T  R  +  +        SIYF EYEARELIHNGARIQWH 
Subjt:  LDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHT

Query:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL
        +L N++KHERM +THDSSFLQ SYF SM S Y+SS C N  I+TSYS YRFG QFGFYQD+ NDIG MP AI+L+NIL+H R+C R NTLSELYL A SL
Subjt:  SLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSL

Query:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC
        +PCKHVTQ+F +WW TKH TYFEDN+HHLV+S IP P QP+LPKNRGSN GGK+I LVEAM P LE+++ EHK+ES+NSKS+RHWKRPLKK KVS D   
Subjt:  DPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSC

Query:  GRGL
        GRGL
Subjt:  GRGL

A0A5A7UGW6 PMD domain-containing protein

4.9e-130

53.27

Show/hide

Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL
        MAGELSISLWDLWSF GLPIKG+FY++ IPS+KEL S SRDKTKCLP  CQY  Q Y SI+C QR DR+ SS+   +  +   + F Y            
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL

Query:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*
        ++ K          P   K+Q+REW SRE+MLF E  IRDDLKD T LA  L                C L         C   F Q  S+++   F   
Subjt:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVK---FNN*

Query:  SLDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWH
        SL  + T             HGL L                 H +  WL      H  LP   R  +  +        SIYF EYEARELIHNG RIQWH
Subjt:  SLDFSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWH

Query:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS
         +L N+NKHERM +THDSSFLQ SYF SM S Y+SS C N  I+TSYSPYRFG QFGFYQD+ NDIG MP AI+L+NIL+HWR+C+RRNTLSELYL   S
Subjt:  TSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALS

Query:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS
        L+PCKHVTQRF +WW TKH  YFEDN+HHLVSSAIPPP QP+LPKNRGSN GGK+I LVEAM P LE ++ EH  ESD++KS+RHWKRPLKK KVS D  
Subjt:  LDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDS

Query:  CGRGL
         GRGL
Subjt:  CGRGL

A0A5A7UVI5 PMD domain-containing protein

4.2e-113

49.2

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Query:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL
        MA ELSISLWDLWSFGGLPIKG+FY++ IPS+KEL S SRDKTKCLPT CQYL Q Y SI+C QR DR+ SS+   +  +   + F Y            
Subjt:  MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELIS-SRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPK*LLA--LGFHYDT*GPGATISLL

Query:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLD
        ++ K          P   K+Q+REW SRE+MLF E  IRDDLKD T LA  L                C L           P  G  L    F   SL 
Subjt:  QEAK*GITL*IYSKP*WPKVQSREWFSRENMLFTERSIRDDLKDAT*LAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNN*SLD

Query:  FSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSL
         + T             HGL L                 H +  WL      H  LP   R  +  +        SIYF +YEA ELIHNGARIQWH +L
Subjt:  FSRT-------------HGLSL----------------SHALRPWLVSSLFWH-SLPTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSL

Query:  PNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDP
         N+NKHERM +THDSSFLQ SYF                                  D+ NDIG MP AI+L+NIL+HWR+C+RRNTLSELYL A SL+P
Subjt:  PNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNI*IVTSYSPYRFG*QFGFYQDISNDIGSMPHAISLNNILHHWRLCVRRNTLSELYLSALSLDP

Query:  CKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGR
        CKHVTQRF +WW TKH TYFEDN+HHLVSSAIPPP QP+LPKNRGSN GGK+I LVEAM P LE ++ EH  ESD++KS+RHWKRPLKK KVS D   GR
Subjt:  CKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNSKSNRHWKRPLKKVKVSDDDSCGR

Query:  GL
        GL
Subjt:  GL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCAGGTGAGTTATCCATTTCTCTGTGGGACCTATGGTCATTTGGGGGCCTTCCGATTAAAGGGGAGTTCTACAAGAAAATCATCCCTTCATATAAAGAGTTAATCTC
CTCACGAGATAAGACAAAATGTCTTCCAACGATATGTCAATATCTTCTTCAGGTATATAATTCAATAATTTGTATGCAGAGGGGTGACCGCACGATCTCTTCAAGAATGA
CTCCCAAGTGACTATTAGCTCTTGGATTTCATTATGATACCTAGGGTCCAGGAGCTACGATAAGCCTATTGCAGGAAGCAAAATAAGGCATCACACTTTAAATCTACTCA
AAACCCTGATGGCCGAAGGTTCAATCCCGAGAATGGTTCTCTAGAGAAAACATGTTATTTACAGAACGTAGCATAAGGGACGATCTGAAGGATGCAACATAACTAGCTGT
GCTTCTTTGTGTTTCTGCATAAGGGATCATTTCTTCGCCCTAGAGTATTTAGGATTGCAAGCTCAATGGTCGACGAATCTATCTATAGTCTTGCAGTCCTAGTTTTGGTC
AACATTTATCATGGGTTAAGTTTAATAACTAAAGCCTCGACTTCAGTAGGACGCATGGACTTTCACTTTCCCATGCATTACGCCCATGGCTGGTTAGCTCATTATTTTGG
CACTCATTACCCACTTTCGAAAGAAGTTCGAGGTCCCAAGATGGCTAACTTTTCTGGTGAAGCAGGTCTATTTATTTCGAAGAATATGAGGCACGAGAACTAATTCATAA
TGGTGCAAGAATTCAGTGGCATACGAGTCTTCCAAACCAGAATAAACATGAACGCATGACTAATACTCATGATTCATCATTTCTCCAGACTTCCTATTTTGCAAGCATGT
GTTCCTACTACGTGTCATCCTGCTGTGGGAATATTTAGATCGTAACATCATACAGTCCGTATCGATTTGGATGACAATTTGGCTTTTACCAGGATATCTCCAATGATATA
GGGAGCATGCCCCATGCGATCTCACTGAATAATATATTACATCATTGGAGGTTGTGTGTGAGGCGTAACACTTTATCTGAGTTATACTTGTCTGCCCTTTCGTTAGATCC
TTGCAAGCATGTTACGCAACGATTTAAAAATTGGTGGGCCACAAAGCACGAGACCTATTTTGAGGACAACAAACACCATTTGGTGAGCAGTGCCATTCCTCCCCCATTGC
AACCAAAACTACCCAAGAACCGAGGGAGCAACCAGGGTGGTAAGCAAATTTGTTTGGTTGAAGCGATGACTCCTACCCTCGAGAAGGACTTGACGGAGCATAAAGAAGAG
AGTGACAATAGCAAAAGTAATCGTCATTGGAAAAGACCTTTGAAGAAAGTGAAGGTATCAGATGATGACTCTTGCGGAAGGGGCTTAA

mRNA sequence

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Protein sequence

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MAGELSISLWDLWSFGGLPIKGEFYKKIIPSYKELISSRDKTKCLPTICQYLLQVYNSIICMQRGDRTISSRMTPKLLALGFHYDT*GPGATISLLQEAK*GITL*IYSK
P*WPKVQSREWFSRENMLFTERSIRDDLKDATLAVLLCVSA*GIISSP*SI*DCKLNGRRIYL*SCSPSFGQHLSWVKFNNSLDFSRTHGLSLSHALRPWLVSSLFWHSL
PTFERSSRSQDG*LFW*SRSIYFEEYEARELIHNGARIQWHTSLPNQNKHERMTNTHDSSFLQTSYFASMCSYYVSSCCGNIIVTSYSPYRFG*QFGFYQDISNDIGSMP
HAISLNNILHHWRLCVRRNTLSELYLSALSLDPCKHVTQRFKNWWATKHETYFEDNKHHLVSSAIPPPLQPKLPKNRGSNQGGKQICLVEAMTPTLEKDLTEHKEESDNS
KSNRHWKRPLKKVKVSDDDSCGRGLX

Chy2G042280 (gene) of Cucumber (hystrix) v1 genome