; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G042440 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G042440
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationchrH02:23530304..23531230
RNA-Seq ExpressionChy2G042440
SyntenyChy2G042440
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150016.3 zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]3.78e-11399.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_008465020.2 PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]8.11e-11099.27Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

XP_008465021.2 PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]4.19e-11299.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_011656267.2 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]7.61e-11199.27Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

XP_038880145.1 zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Benincasa hispida]4.43e-11298.57Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTT SCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein6.5e-8699.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X26.5e-8699.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A1S3CNB1 uncharacterized protein LOC103502740 isoform X13.6e-8499.27Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

A0A1S3CPF6 uncharacterized protein LOC103502740 isoform X33.6e-8499.27Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X36.5e-8699.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c2.6e-0726.15Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGW
        GDW C +C   NF++R +C RC +P       +T S     +   G+ Y    S    NY    +       +S      G   +     +        +
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGW

Query:  KSGDWICPRMGCGVHNYASRMECFKCKTPR
        ++GDW C   GCG HN+A  + C +C   R
Subjt:  KSGDWICPRMGCGVHNYASRMECFKCKTPR

O95218 Zinc finger Ran-binding domain-containing protein 22.4e-0535.96Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q19QU3 Zinc finger Ran-binding domain-containing protein 22.4e-0535.96Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 24.9e-0637.08Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + + DW C    CG  N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q9R020 Zinc finger Ran-binding domain-containing protein 22.4e-0535.96Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein3.6e-0427.71Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRC---GAFKSVYPGDY
        GDW C  C+ +NF K   C RC  + +           +      GDW C T  C   N++    C RC      + + PG++
Subjt:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRC---GAFKSVYPGDY

AT2G17975.1 zinc finger (Ran-binding) family protein1.2e-1835.57Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------
        GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYASR  C +CG  K V        PG                
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------

Query:  -DYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC
         D    ++      + AS+   W+SGDWIC    CG HNY+SR++C KC
Subjt:  -DYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein2.2e-5764.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYASD-A
        MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TE +AGDWYC  ++CG+HNYASR +C+RCG  K  Y    YGA M+    Y +D A
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYASD-A

Query:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG
        + PPGWK+GDW+CPR+GCGVHNYASR ECFKCKT RD+GG
Subjt:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein9.8e-3442.86Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG
        GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++   GDWYCT  +CG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG

Query:  SDQYASD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
           + +D   S  PG      WKSGDWIC R+GC  HN+ASRMECF+C  PRDF
Subjt:  SDQYASD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.3e-3036.48Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDWYC    CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD
                G +  G        +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Subjt:  -------YGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGTCAGCAGGCGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCTAAGTATGGAGGTCCAGACCC
ATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTTTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGCATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGTCAGCAGGCGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCTAAGTATGGAGGTCCAGACCC
ATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTTTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGCATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTGTAA
Protein sequenceShow/hide protein sequence
MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWI
CPRMGCGVHNYASRMECFKCKTPRDFGGAV