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Chy2G042560 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G042560
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRibonucloprotein
Genome locationchrH02:23671775..23687541
RNA-Seq ExpressionChy2G042560
SyntenyChy2G042560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4288598.1 unnamed protein product [Prunus armeniaca]3.43e-0996.88Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

KAE8698364.1 NHP2-like protein 1 [Hibiscus syriacus]3.60e-09100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

KAF5459149.1 hypothetical protein F2P56_023129, partial [Juglans regia]2.28e-09100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

TXG68506.1 hypothetical protein EZV62_003441 [Acer yangbiense]3.06e-0965.38Show/hide
Query:  ECALCFRPI*ASPRPSLRSYRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        ECA+C RP+      +    RPVIACSVT+NE SQLK+QIQQLKDA EKLLI
Subjt:  ECALCFRPI*ASPRPSLRSYRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

XP_020969110.1 LOW QUALITY PROTEIN: NHP2-like protein 1 [Arachis ipaensis]3.43e-09100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

TrEMBL top hitse value%identityAlignment
A0A444WXD4 Ribonucloprotein6.4e-07100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

A0A445LSL6 Ribonucloprotein6.4e-07100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

A0A5C7IJ19 Uncharacterized protein3.8e-0765.38Show/hide
Query:  ECALCFRPI*ASPRPSLRSYRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        ECA+C RP+      +    RPVIACSVT+NE SQLK+QIQQLKDA EKLLI
Subjt:  ECALCFRPI*ASPRPSLRSYRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

A0A6J1HQD3 Ribonucloprotein6.4e-07100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

B7FKG0 Ribonucloprotein6.4e-07100Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

SwissProt top hitse value%identityAlignment
P55769 NHP2-like protein 17.5e-0568.75Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT  EGSQLK QIQ ++ +IE+LL+
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

Q21568 NHP2-like protein 1 homolog1.2e-0575Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIA S+T NEGSQLKSQIQ++K+ +EKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

Q3B8S0 NHP2-like protein 17.5e-0568.75Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT  EGSQLK QIQ ++ +IE+LL+
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

Q5XH16 NHP2-like protein 15.8e-0571.88Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT  EGSQLK QIQ ++ AIE+LL+
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

Q9U3Z7 NHP2-like protein 1 homolog1.5e-0568.75Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RP++ACSVTTNEGSQLKSQI  ++  IE+LL+
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

Arabidopsis top hitse value%identityAlignment
AT4G12600.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.8e-0990.62Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NE SQLKSQIQ LKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

AT4G12600.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.8e-0990.62Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NE SQLKSQIQ LKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.8e-0990.62Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NE SQLKSQIQ LKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

AT5G20160.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.8e-0990.62Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NE SQLKSQIQ LKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI

AT5G20160.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.8e-0990.62Show/hide
Query:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI
        RPVIACSVT+NE SQLKSQIQ LKDAIEKLLI
Subjt:  RPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATATCCCAATTTTTCAACATCCAAACTCCTCAAAATCCTTCTTCTTTGCTTGCTTAATCTTTGTACGAACGATGCCCGCAGAGCAAGTAGGCATACCCTTTGGCTGACG
CTCAACTTATAATAACCATTCTTGATCTTGTTCAACAAGCTACTAACTACAAGCAAATCAAGAAGGACGCCAATGAAGCTACCAAGATGCTTAACAGAGGTATATCTGAG
TTTGTCGTAATGGTTGCGGATACGGAGCCTCTTGAAATCCTTCTACATCTTCCTCTGCTAGCTGAGGATAAGAATGTGCTCTATGTTTTCGTCCCATCTAAGCAAGCCCT
CGACCGAGCCTGCGGAGTTACAGACCTGTTATAGCTTGTTCTGTGACAACAAACGAAGGAAGCCAATTGAAGTCACAAATACAGCAACTTAAGGATGCGATTGAGAAGCT
GTTGATTTGAAGATGTAGGGAATTGTGATTTCAGTATGATGGGCTTCTTAGTTCAGAGTGGTTTGCTCCCTTAGAGGCTTTGACTGATGCGAGTTGTGCAAGTAGAGGAA
TATGTGTAACAAACATTAGAATTTTATTTTTCAAGAGATATGATTTATTTATTTAAAAATGATAACATGATCCTTCATTCTGTTAGCCATCTTGTTTCTTTCAGCAAAAT
TTGGTTAGATATTTGACATTAAGTTTTTCTAAGGCTATACTTTCAATAGAGTTTAAATTTAGGTAGAGTGAATAAATTATTTGAAATATTTATACTTGAAATC
mRNA sequenceShow/hide mRNA sequence
AATATCCCAATTTTTCAACATCCAAACTCCTCAAAATCCTTCTTCTTTGCTTGCTTAATCTTTGTACGAACGATGCCCGCAGAGCAAGTAGGCATACCCTTTGGCTGACG
CTCAACTTATAATAACCATTCTTGATCTTGTTCAACAAGCTACTAACTACAAGCAAATCAAGAAGGACGCCAATGAAGCTACCAAGATGCTTAACAGAGGTATATCTGAG
TTTGTCGTAATGGTTGCGGATACGGAGCCTCTTGAAATCCTTCTACATCTTCCTCTGCTAGCTGAGGATAAGAATGTGCTCTATGTTTTCGTCCCATCTAAGCAAGCCCT
CGACCGAGCCTGCGGAGTTACAGACCTGTTATAGCTTGTTCTGTGACAACAAACGAAGGAAGCCAATTGAAGTCACAAATACAGCAACTTAAGGATGCGATTGAGAAGCT
GTTGATTTGAAGATGTAGGGAATTGTGATTTCAGTATGATGGGCTTCTTAGTTCAGAGTGGTTTGCTCCCTTAGAGGCTTTGACTGATGCGAGTTGTGCAAGTAGAGGAA
TATGTGTAACAAACATTAGAATTTTATTTTTCAAGAGATATGATTTATTTATTTAAAAATGATAACATGATCCTTCATTCTGTTAGCCATCTTGTTTCTTTCAGCAAAAT
TTGGTTAGATATTTGACATTAAGTTTTTCTAAGGCTATACTTTCAATAGAGTTTAAATTTAGGTAGAGTGAATAAATTATTTGAAATATTTATACTTGAAATC
Protein sequenceShow/hide protein sequence
NIPIFQHPNSSKSFFFACLIFVRTMPAEQVGIPFGRSTYNNHS*SCSTSY*LQANQEGRQSYQDA*QRYI*VCRNGCGYGAS*NPSTSSSAS*G*ECALCFRPI*ASPRP
SLRSYRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLIRCREL*FQYDGLLSSEWFAPLEALTDASCASRGICVTNIRILFFKRYDLFIK**HDPSFC*PSCFFQQNLVRY
LTLSFSKAILSIEFKFRSE*II*NIYT*NX