; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G042600 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G042600
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchrH02:23721444..23722183
RNA-Seq ExpressionChy2G042600
SyntenyChy2G042600
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653086.1 hypothetical protein Csa_019584 [Cucumis sativus]4.14e-14185.19Show/hide
Query:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F+HDHNLFDQS P NA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLALKACCG PKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVF+NLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

TYK26926.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.44e-12982.3Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLHTLALKCG K DVFVGNALVTMYSR EHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

XP_004150024.3 pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis sativus]9.33e-13885.19Show/hide
Query:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F+HDHNLFDQS P NA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLALKACCG PKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVF+NLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

XP_008444010.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis melo]1.17e-12781.48Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG + DVFVGNALVTMYSR EHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

XP_038878737.1 pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 [Benincasa hispida]3.32e-12477.37Show/hide
Query:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        FQHD+NLFDQS P NA   NR LLNYL RDGAFQSLRFFK   +W LDG+ DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLE+AFSVFENLHDPDIVSWNT LSGF+KSENALSFA RMNL GV+FD VTYTTAL+F LDG+DFLFGWQLHTLALKCG KGDVFVGNAL+TMYSRWEHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDAR+VFDEM SRDRV WSAM+T YAQEG++GL+AIL+F+QMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

TrEMBL top hitse value%identityAlignment
A0A0A0LWF3 Uncharacterized protein5.1e-11284.65Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F+HDHNLFDQS  PNA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLALKACCG PKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVF+NLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQ
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAI VFVQ
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQ

A0A1S3BA52 pentatricopeptide repeat-containing protein At4g32430, mitochondrial9.3e-10681.48Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG + DVFVGNALVTMYSR EHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

A0A5A7TTA5 Pentatricopeptide repeat-containing protein9.3e-10681.48Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG + DVFVGNALVTMYSR EHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

A0A5D3DTC6 Pentatricopeptide repeat-containing protein1.1e-10682.3Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LALKACCGLPKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLHTLALKCG K DVFVGNALVTMYSR EHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFVQMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

A0A6J1EK48 pentatricopeptide repeat-containing protein At4g32430, mitochondrial2.2e-9975.31Show/hide
Query:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG
        FQHDHNLFDQS  PNA   NR LLNYL R+ AFQ+LR FK + +WGLDGNAD FTL LALKACCG+PKLGRQIHGFVISSG                 SG
Subjt:  FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SG

Query:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL
        QLERAFSVFENLHDPDIVSWNT LSGF+KSE+ALSFA  MNL GV FD VTYTTAL+F LDG+DF+FGWQLHTL LKCGF+ D+FVGNAL+TMYSRWEHL
Subjt:  QLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHL

Query:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        VDAR+VFDEM SRDRV WSAMIT YAQEG++GL+AILVF+QMV
Subjt:  VDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

SwissProt top hitse value%identityAlignment
O80647 Pentatricopeptide repeat-containing protein At2g396205.2e-2134.76Show/hide
Query:  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVSWNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTA
        L+L L+ C     L  Q+HG +I SG     QL  A+S          +F+++ DP +V WN+ + G+ ++     AL F   M+  KG++ D  ++T A
Subjt:  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVSWNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTA

Query:  LSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM
        L       DF  G ++H L  + G + DV++G ALV MY +   LV AR+VFD+M  +D V W+ M++  AQ G +   A+L+F  M
Subjt:  LSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM

Q0WNP3 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic5.2e-2132.61Show/hide
Query:  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGV
        A+  T+V  L+AC   G   LG+++H  +I +                   G+   AF+V + L   D+VSW   +SG         AL F + M  +GV
Subjt:  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGV

Query:  EFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEG
        E +  TY++AL    + +  L G  +H++A K     +VFVG+AL+ MY++   + +A +VFD MP ++ V W AMI  YA+ G
Subjt:  EFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEG

Q84MA3 Pentatricopeptide repeat-containing protein At4g32430, mitochondrial1.2e-4642.32Show/hide
Query:  HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SGQL
        H LFD SS        N ++   L R+   ++L  FK N Q G  G + DE TL LALKAC G  K G QIHGF  +SG                 +G+ 
Subjt:  HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SGQL

Query:  ERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVD
        + A  +FENL DPD+VSWNT LSGF+ ++ AL+F  RM   GV FD+ TY+TALSF +  + FL G QL +  +K G + D+ VGN+ +TMYSR      
Subjt:  ERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVD

Query:  ARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        AR+VFDEM  +D + W+++++  +QEG  G +A+++F  M+
Subjt:  ARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

Q9FM64 Pentatricopeptide repeat-containing protein At5g55740, chloroplastic1.8e-2125.11Show/hide
Query:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENLHD
        NAV +N  ++ Y+      +++R F +  + G++      +  L+  A  G  + G+Q H   I +G                  G +E A  VF+ + +
Subjt:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENLHD

Query:  PDIVSWNTFLSGFEKS---ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMP
         D+V+WN  +SG+ +    E+A+   + M L+ +++D VT  T +S     ++   G ++    ++  F+ D+ + + ++ MY++   +VDA+KVFD   
Subjt:  PDIVSWNTFLSGFEKS---ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMP

Query:  SRDRVLWSAMITDYAQEGNNGLQAILVFVQM
         +D +LW+ ++  YA+ G +G +A+ +F  M
Subjt:  SRDRVLWSAMITDYAQEGNNGLQAILVFVQM

Q9SCT2 Pentatricopeptide repeat-containing protein At3g504209.1e-2631.62Show/hide
Query:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENL
        +AV +N  ++  L  D     L FF+N    G+D    +FT  + L  C   G   LG+ IH  +I S S                 G +  AF VF  +
Subjt:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENL

Query:  HDPDIVSWNTFLSGFEKS----ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFD
        H+P++VSWN+ +SG  ++    +  L + R + +     D  T++ A+S   + + F+ G  LH    K G++  VFVG  L++MY +      A+KVFD
Subjt:  HDPDIVSWNTFLSGFEKS----ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFD

Query:  EMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM
         M  RD VLW+ MI  +++ GN+ L A+  F++M
Subjt:  EMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM

Arabidopsis top hitse value%identityAlignment
AT2G39620.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-2234.76Show/hide
Query:  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVSWNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTA
        L+L L+ C     L  Q+HG +I SG     QL  A+S          +F+++ DP +V WN+ + G+ ++     AL F   M+  KG++ D  ++T A
Subjt:  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVSWNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTA

Query:  LSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM
        L       DF  G ++H L  + G + DV++G ALV MY +   LV AR+VFD+M  +D V W+ M++  AQ G +   A+L+F  M
Subjt:  LSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM

AT3G50420.1 Pentatricopeptide repeat (PPR) superfamily protein6.5e-2731.62Show/hide
Query:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENL
        +AV +N  ++  L  D     L FF+N    G+D    +FT  + L  C   G   LG+ IH  +I S S                 G +  AF VF  +
Subjt:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENL

Query:  HDPDIVSWNTFLSGFEKS----ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFD
        H+P++VSWN+ +SG  ++    +  L + R + +     D  T++ A+S   + + F+ G  LH    K G++  VFVG  L++MY +      A+KVFD
Subjt:  HDPDIVSWNTFLSGFEKS----ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFD

Query:  EMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM
         M  RD VLW+ MI  +++ GN+ L A+  F++M
Subjt:  EMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM

AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-2232.61Show/hide
Query:  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGV
        A+  T+V  L+AC   G   LG+++H  +I +                   G+   AF+V + L   D+VSW   +SG         AL F + M  +GV
Subjt:  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGV

Query:  EFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEG
        E +  TY++AL    + +  L G  +H++A K     +VFVG+AL+ MY++   + +A +VFD MP ++ V W AMI  YA+ G
Subjt:  EFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEG

AT4G32430.1 Pentatricopeptide repeat (PPR) superfamily protein8.7e-4842.32Show/hide
Query:  HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SGQL
        H LFD SS        N ++   L R+   ++L  FK N Q G  G + DE TL LALKAC G  K G QIHGF  +SG                 +G+ 
Subjt:  HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKACCGLPKLGRQIHGFVISSG-----------------SGQL

Query:  ERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVD
        + A  +FENL DPD+VSWNT LSGF+ ++ AL+F  RM   GV FD+ TY+TALSF +  + FL G QL +  +K G + D+ VGN+ +TMYSR      
Subjt:  ERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVD

Query:  ARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV
        AR+VFDEM  +D + W+++++  +QEG  G +A+++F  M+
Subjt:  ARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV

AT5G55740.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-2225.11Show/hide
Query:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENLHD
        NAV +N  ++ Y+      +++R F +  + G++      +  L+  A  G  + G+Q H   I +G                  G +E A  VF+ + +
Subjt:  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGS-----------------GQLERAFSVFENLHD

Query:  PDIVSWNTFLSGFEKS---ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMP
         D+V+WN  +SG+ +    E+A+   + M L+ +++D VT  T +S     ++   G ++    ++  F+ D+ + + ++ MY++   +VDA+KVFD   
Subjt:  PDIVSWNTFLSGFEKS---ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMP

Query:  SRDRVLWSAMITDYAQEGNNGLQAILVFVQM
         +D +LW+ ++  YA+ G +G +A+ +F  M
Subjt:  SRDRVLWSAMITDYAQEGNNGLQAILVFVQM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCAAGTTTCAACATGACCACAACCTGTTTGATCAAAGTTCTCCAAATGCAGTCTTTTTCAACCGCGCTTTGCTCAATTACTTGCCCAGAGACGGAGCATTTCA
ATCCCTTCGCTTTTTTAAGAACAATTTTCAGTGGGGTCTTGATGGTAATGCCGATGAGTTCACTTTGGTTCTTGCTCTGAAGGCCTGTTGTGGGCTTCCTAAACTAGGTA
GACAAATTCATGGATTTGTTATTTCTTCTGGATCTGGGCAGCTTGAGAGGGCTTTTAGTGTATTCGAAAATTTACATGACCCAGATATTGTTTCGTGGAATACGTTTCTT
TCCGGGTTCGAGAAGAGTGAGAACGCTTTGAGTTTTGCTCGGAGGATGAATTTAAAAGGGGTTGAGTTTGATTCTGTGACTTATACTACAGCACTTTCCTTTCGCTTAGA
TGGAAAAGATTTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCTGAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGGTGGG
AACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCCGAGATCGGGTGCTCTGGAGTGCGATGATTACTGATTATGCACAAGAGGGAAATAATGGGTTACAG
GCCATTTTGGTGTTCGTTCAAATGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCAAGTTTCAACATGACCACAACCTGTTTGATCAAAGTTCTCCAAATGCAGTCTTTTTCAACCGCGCTTTGCTCAATTACTTGCCCAGAGACGGAGCATTTCA
ATCCCTTCGCTTTTTTAAGAACAATTTTCAGTGGGGTCTTGATGGTAATGCCGATGAGTTCACTTTGGTTCTTGCTCTGAAGGCCTGTTGTGGGCTTCCTAAACTAGGTA
GACAAATTCATGGATTTGTTATTTCTTCTGGATCTGGGCAGCTTGAGAGGGCTTTTAGTGTATTCGAAAATTTACATGACCCAGATATTGTTTCGTGGAATACGTTTCTT
TCCGGGTTCGAGAAGAGTGAGAACGCTTTGAGTTTTGCTCGGAGGATGAATTTAAAAGGGGTTGAGTTTGATTCTGTGACTTATACTACAGCACTTTCCTTTCGCTTAGA
TGGAAAAGATTTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCTGAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGGTGGG
AACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCCGAGATCGGGTGCTCTGGAGTGCGATGATTACTGATTATGCACAAGAGGGAAATAATGGGTTACAG
GCCATTTTGGTGTTCGTTCAAATGGTGTGA
Protein sequenceShow/hide protein sequence
MIPKFQHDHNLFDQSSPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGSGQLERAFSVFENLHDPDIVSWNTFL
SGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQ
AILVFVQMV