; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G043400 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G043400
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSerine-rich protein-related
Genome locationchrH02:25074423..25074709
RNA-Seq ExpressionChy2G043400
SyntenyChy2G043400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653030.1 hypothetical protein Csa_019924 [Cucumis sativus]1.01e-5798.95Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSS SSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

TYK10353.1 Serine-rich protein-related [Cucumis melo var. makuwa]4.42e-4481.91Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRP
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+ SSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRP
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRP

XP_008443918.1 PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]9.03e-4582.11Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+ SSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]8.16e-3671.43Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MA+KS S   K  + G+SRKCLCSPTTHPGSFRCSFHRNR K +S+ SSSSS++ IT+A LEL   AKANA+R+FLL +I+PSSNDLQRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]2.01e-3673.47Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSS  K  + G SRKCLCSPTTHPGSFRCS HRNR K+S+  SSSSS++ ITTA L+L   AKANALRSFLLQ+I PSS DLQRRRNF P+PS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein1.8e-4298.95Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSS SSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

A0A1S3B8Q0 uncharacterized protein LOC1034873969.7e-3382.11Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+ SSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

A0A5A7U6S1 Serine-rich protein-related9.7e-3382.11Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+ SSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

A0A5D3CER3 Serine-rich protein-related2.8e-3281.91Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRP
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+ SSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRP
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRP

A0A6J1EG01 uncharacterized protein LOC1114339806.8e-2671.43Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        MA+KS S   K  + G+SRKCLCSPTTHPGSFRCSFHRNR K +S+ SSSSS++ IT+A LEL   AKANA+R+FLL +I+PSSNDLQRRRNFHPRPS
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related5.0e-0542.11Show/hide
Query:  GSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKI--SSSTSSSSSLSLITTAD
        G S     ++   + CLC+PTTHPGSFRC +HR    +  S  TS  S+LS++   D
Subjt:  GSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKI--SSSTSSSSSLSLITTAD

AT5G11090.1 serine-rich protein-related7.4e-0939.08Show/hide
Query:  SRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS
        SR+C+CSPTTHPGSFRCS H+   N H   +++ +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + PRPS
Subjt:  SRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPS

AT5G20370.1 serine-rich protein-related4.8e-0839.29Show/hide
Query:  SSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTAD-----------LELAKANAL------------RSFLLQMIKPSSND
        SS H+       RKCLCSPTTHPGSFRCSFHR      S T +SS++      D            +LA  N+L            RS    + KPSS  
Subjt:  SSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTAD-----------LELAKANAL------------RSFLLQMIKPSSND

Query:  LQRRRNFHPRPS
          RR  F PR S
Subjt:  LQRRRNFHPRPS

AT5G25280.1 serine-rich protein-related2.2e-0835.58Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH
        ++S   S+ HK P   + R+C+CSPTTHPGSFRCS H+   N H   +++ +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + 
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH

Query:  PRPS
        PR S
Subjt:  PRPS

AT5G25280.2 serine-rich protein-related2.2e-0835.58Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH
        ++S   S+ HK P   + R+C+CSPTTHPGSFRCS H+   N H   +++ +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + 
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSTSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH

Query:  PRPS
        PR S
Subjt:  PRPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCA
CCGGAACCGCCACAAGATCTCTTCCTCTACGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGC
TCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCA
CCGGAACCGCCACAAGATCTCTTCCTCTACGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGC
TCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAG
Protein sequenceShow/hide protein sequence
MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSTSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSX