CuGenDBv2

Gene ID	Chy2G043490
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Genome location	chrH02:25156649..25157220
RNA-Seq Expression	Chy2G043490
Synteny	Chy2G043490
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050039.1 putative E3 ubiquitin-protein ligase RHY1A [Cucumis melo var. makuwa]

1.86e-73

90.16

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM+RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_004146704.1 uncharacterized protein LOC101215379 [Cucumis sativus]

1.42e-83

93.85

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQN+IWSDSP IAAQVLTRRSVLCLYTSN+EA L SNPSMERRLLMEAEGE+ELDGIAREA+RRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWT
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTW+
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWT

XP_008443904.1 PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]

5.57e-75

90.98

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM+RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_008443905.1 PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]

7.35e-73

90.98

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]

1.17e-62

81.15

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSNHE+ L SNPS++R LL+EA  + ELDG AREA+RRLD+RL RTQRKSED GREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSW KLNW GVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWJ8 Uncharacterized protein

1.5e-63

93.85

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQN+IWSDSP IAAQVLTRRSVLCLYTSN+EA L SNPSMERRLLMEAEGE+ELDGIAREA+RRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWT
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTW+
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWT

A0A1S3B9W3 uncharacterized protein LOC103487385 isoform X1

5.9e-57

90.98

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM+RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A1S3B9Y1 uncharacterized protein LOC103487385 isoform X2

2.5e-55

90.98

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A5A7U973 Putative E3 ubiquitin-protein ligase RHY1A

8.5e-56

90.16

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSNHEA LVSNPSM+RRLLMEA GE+ELDGIAREA+RRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A6J1E765 uncharacterized protein LOC111430042 isoform X2

2.0e-41

72.95

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Query:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSNHE  L SNPS+ER LL+EA+ +++LDG AREA+RRLDER LRTQRKS        
Subjt:  MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
         RK +W KLNW GVE+DKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G15580.1 RING/U-box superfamily protein

7.5e-12

39.13

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Query:  MAGTLPGVECARRRRCH------QNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGEN---ELDGIAREARRRLDERLL---RT
        MAG LPGVECARRRR H      +++  +   + A  V TRR    LYT+NHE+        ER +  ++ GE+   +LDG A+EA++RL++RL    RT
Subjt:  MAGTLPGVECARRRRCH------QNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGEN---ELDGIAREARRRLDERLL---RT

Query:  QRKSEDNGREMMRRK
        ++  +D G ++ + K
Subjt:  QRKSEDNGREMMRRK

AT2G15580.2 RING/U-box superfamily protein

2.8e-11

38.46

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Query:  MAGTLPGVECARRRRCH------QNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGEN---ELDGIAREARRRLDERLLRTQRK
        MAG LPGVECARRRR H      +++  +   + A  V TRR    LYT+NHE+        ER +  ++ GE+   +LDG A+EA++RL++RL    R 
Subjt:  MAGTLPGVECARRRRCH------QNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGEN---ELDGIAREARRRLDERLLRTQRK

Query:  SEDNGREMMRRKFSWRK
        S  +G+ +  +  +W K
Subjt:  SEDNGREMMRRKFSWRK

Sequences

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CDS sequence

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ATGGCCGGAACGCTTCCTGGTGTAGAATGTGCTCGAAGAAGACGTTGTCATCAAAACAATATATGGTCAGATTCACCGTCAATCGCCGCTCAGGTTTTAACTAGGAGATC
CGTTCTCTGCTTGTACACAAGTAACCACGAAGCGTTCCTCGTTTCAAATCCATCTATGGAGAGACGTTTGTTAATGGAGGCAGAAGGAGAAAATGAACTGGATGGAATTG
CGAGAGAAGCGAGGAGGAGATTGGATGAGCGATTGTTGAGAACGCAGAGGAAATCAGAAGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAAT
TGGATTGGCGTCGAAGAAGATAAGTGCGGTCAATGCCTGGTGAAGAAGACGACTTGGACTTGA

mRNA sequence

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Protein sequence

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MAGTLPGVECARRRRCHQNNIWSDSPSIAAQVLTRRSVLCLYTSNHEAFLVSNPSMERRLLMEAEGENELDGIAREARRRLDERLLRTQRKSEDNGREMMRRKFSWRKLN
WIGVEEDKCGQCLVKKTTWT

Chy2G043490 (gene) of Cucumber (hystrix) v1 genome