CuGenDBv2

Gene ID	Chy2G043730
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cytochrome c oxidase assembly factor 6
Genome location	chrH02:25371847..25372364
RNA-Seq Expression	Chy2G043730
Synteny	Chy2G043730
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

2.71e-78

99.12

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

XP_011655945.1 uncharacterized protein LOC101212489 isoform X1 [Cucumis sativus]

1.11e-77

98.25

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EADSSGGSDEVHTDVLSESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]

5.71e-71

90.35

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEAD+SGG DEVH+DVL+ SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]

3.31e-70

87.72

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA+E D SGGS+EVHTDVL+E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

5.93e-73

92.98

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEAD+SGG DEVH+DVL+ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA + KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTX1 Uncharacterized protein

2.8e-58

98.25

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EADSSGGSDEVHTDVLSESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

9.5e-59

99.12

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

9.5e-59

99.12

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A6J1BZF0 uncharacterized protein LOC111006886

3.5e-53

90.35

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAVEAD+SGG DEVH+DVL+ SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

A0A6J1I7I2 cytochrome c oxidase assembly factor 6

1.3e-52

87.72

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA+E D SGGS+EVHTDVL+E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

1.1e-40

64.6

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA++  +S   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +   CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

1.1e-40

64.6

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Query:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA++  +S   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +   CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences

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CDS sequence

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ATGGCTGTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATCGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCT
TGTGTGGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTGTAAAGCTTTGAGAGCAGATTATGCCAAACTTTGC
AGAGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTTGAGGAGAGGTCCGTTGATACTTCCT
CAGCCTTACACTTTTAAGCCCACTAATTAA

mRNA sequence

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Protein sequence

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MAVEADSSGGSDEVHTDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRGPLILP
QPYTFKPTN

Chy2G043730 (gene) of Cucumber (hystrix) v1 genome