; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G043980 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G043980
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUBP1-associated proteins 1C-like isoform X3
Genome locationchrH02:25587105..25588442
RNA-Seq ExpressionChy2G043980
SyntenyChy2G043980
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8126059.1 hypothetical protein FH972_020810 [Carpinus fangiana]2.59e-1327.31Show/hide
Query:  PSSSTALRRFQVPIPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK
        P     L    + I  P E   +KLI L +PDP          +S ++R+     + + I     G KK  K+E+ C++C V ATSE  FN H+ GKKHK
Subjt:  PSSSTALRRFQVPIPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK

Query:  AKEGRGQVQ-------------QTTRE---------------------------------------------------EPNQREEDHKEKLDHPVDNIDK
        AKE R + Q             +TT+                                                    + NQ  ED K          +K
Subjt:  AKEGRGQVQ-------------QTTRE---------------------------------------------------EPNQREEDHKEKLDHPVDNIDK

Query:  NPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKGL
         P  +K K+ KF CE+C +      VM  H NG+KH++RL +L Q+ G 
Subjt:  NPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKGL

KAF8033745.1 hypothetical protein BT93_C0109 [Corymbia citriodora subsp. variegata]5.23e-1437.21Show/hide
Query:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEG----RGQVQQT
        KPE  + ++LI L RP P     KRKA  S +    + D+  T         KK  K+E+ C++C V ATSE     H+ GKKHK+KE     +   ++ 
Subjt:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEG----RGQVQQT

Query:  TREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ
        T    NQ  +D K  L  P    N++K     KNK  +F CE+C +    M VM SH  G+KH ARL  L Q
Subjt:  TREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ

KCW78821.1 hypothetical protein EUGRSUZ_C00251 [Eucalyptus grandis]2.72e-1336.63Show/hide
Query:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEG----RGQVQQT
        KPE ++ ++LI L RPDP     KRKA  S          S      S    KK  K+E+ C++C V ATSE     H+ GKKHK KE     +   + T
Subjt:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEG----RGQVQQT

Query:  TREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ
        T    NQ  +D K  L  P  V N++ N    + K  +F C +C +    + VM SH  G+KH ARL +L Q
Subjt:  TREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ

XP_008443847.1 PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo]3.44e-8573.91Show/hide
Query:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF
        MNE VN    PSSSTAL    VP           PKPEEDEMNKLITLERPDP KF+ KRKA   +          ERDQ QTIIPT WIGSKKLAK+EF
Subjt:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF

Query:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR
        VCSMCNVKATSEISFNAHINGKKHKAKEGR QVQQTT +EPNQ EED KEKLDHPV NIDKNP +EKNKRLKFRCEIC+V    MAVMVSHNNGRKHKAR
Subjt:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR

Query:  LSKLSQQ
        L KLSQQ
Subjt:  LSKLSQQ

XP_038880353.1 zinc finger protein 385B [Benincasa hispida]6.89e-4855.56Show/hide
Query:  SSSTALRRFQVPIP-----KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHING
        SSS+ L    VP P     KP +D+ NKLI L +PDP KF  KRKAE   +    E D  Q   PT WI SKKLAK+EFVCSMCNV+ TSEISFNAH+ G
Subjt:  SSSTALRRFQVPIP-----KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHING

Query:  KKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKGL
        KKH AKEGR    QT    P    ED KEKLD+   + DK   ++     KF C+IC++ T CMA+MVSHNNG+KHKARL KLSQQ  L
Subjt:  KKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKGL

TrEMBL top hitse value%identityAlignment
A0A059CKW4 Uncharacterized protein2.5e-1136.32Show/hide
Query:  NPSSSTALRRFQVPIPKPEEDEMNK--LITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGK
        N    + L R     P   + E+NK  LI L RPDP     KRKA  S S   DE          S    KK  K+E+ C++C V ATSE     H+ GK
Subjt:  NPSSSTALRRFQVPIPKPEEDEMNK--LITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGK

Query:  KHKAKEG----RGQVQQTTREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ
        KHK KE     +   + TT    NQ  +D K  L  P  V N++ N    + K  +F C +C +    + VM SH  G+KH ARL +L Q
Subjt:  KHKAKEG----RGQVQQTTREEPNQREEDHKEKLDHP--VDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQ

A0A1S3B9S7 uncharacterized protein LOC1034873431.9e-6773.91Show/hide
Query:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF
        MNE VN    PSSSTAL    VP           PKPEEDEMNKLITLERPDP KF+ KRKA   +          ERDQ QTIIPT WIGSKKLAK+EF
Subjt:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF

Query:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR
        VCSMCNVKATSEISFNAHINGKKHKAKEGR QVQQTT +EPNQ EED KEKLDHPV NIDKNP +EKNKRLKFRCEIC+V    MAVMVSHNNGRKHKAR
Subjt:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR

Query:  LSKLSQQ
        L KLSQQ
Subjt:  LSKLSQQ

A0A5D3B800 UBP1-associated proteins 1C-like isoform X31.9e-6773.91Show/hide
Query:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF
        MNE VN    PSSSTAL    VP           PKPEEDEMNKLITLERPDP KF+ KRKA   +          ERDQ QTIIPT WIGSKKLAK+EF
Subjt:  MNERVN----PSSSTALRRFQVP----------IPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRR-----DERDQSQTIIPTSWIGSKKLAKDEF

Query:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR
        VCSMCNVKATSEISFNAHINGKKHKAKEGR QVQQTT +EPNQ EED KEKLDHPV NIDKNP +EKNKRLKFRCEIC+V    MAVMVSHNNGRKHKAR
Subjt:  VCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKAR

Query:  LSKLSQQ
        L KLSQQ
Subjt:  LSKLSQQ

A0A5N6RXK0 Uncharacterized protein1.1e-1127.42Show/hide
Query:  PSSSTALRRFQVPIPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK
        P     L    + I  P E   +KLI L +PDP          +S ++R+     + + I     G KK  K+E+ C++C V ATSE  FN H+ GKKHK
Subjt:  PSSSTALRRFQVPIPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK

Query:  AKEGRGQVQ-------------QTTRE---------------------------------------------------EPNQREEDHKEKLDHPVDNIDK
        AKE R + Q             +TT+                                                    + NQ  ED K          +K
Subjt:  AKEGRGQVQ-------------QTTRE---------------------------------------------------EPNQREEDHKEKLDHPVDNIDK

Query:  NPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKG
         P  +K K+ KF CE+C +      VM  H NG+KH++RL +L Q+ G
Subjt:  NPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKG

A0A6A3BQP7 Uncharacterized protein7.2e-1128.5Show/hide
Query:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTR--
        K   +E NKLI L +PDP + +           +R     ++T  P   + S K+ ++E  C +C   ATSE +   H+ GKKHKAKE   + Q+T +  
Subjt:  KPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTR--

Query:  -----------------EEPNQREEDHKEKLDH---------------------------PVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNG
                         E+    E+   EK +H                            VD ++K P V K K+ KF CEIC +      VM +H  G
Subjt:  -----------------EEPNQREEDHKEKLDH---------------------------PVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNG

Query:  RKHKARLSKLSQQK
        RKH  RL ++ + K
Subjt:  RKHKARLSKLSQQK

SwissProt top hitse value%identityAlignment
O64571 UBP1-associated proteins 1C4.2e-0834.23Show/hide
Query:  CSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHK--A
        CS+C++ ATSE +  AH NGKKH+ K  R   +Q  R+       D K   D+    I+ +  V  +    + C +C+V  +C   ++SH NGRKH+   
Subjt:  CSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHK--A

Query:  RLSKLSQQKGL
         L   +QQ+ L
Subjt:  RLSKLSQQKGL

Arabidopsis top hitse value%identityAlignment
AT2G19380.1 RNA recognition motif (RRM)-containing protein3.0e-0934.23Show/hide
Query:  CSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHK--A
        CS+C++ ATSE +  AH NGKKH+ K  R   +Q  R+       D K   D+    I+ +  V  +    + C +C+V  +C   ++SH NGRKH+   
Subjt:  CSMCNVKATSEISFNAHINGKKHKAKEGRGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHK--A

Query:  RLSKLSQQKGL
         L   +QQ+ L
Subjt:  RLSKLSQQKGL

AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain2.4e-0628.08Show/hide
Query:  IGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK---------------AKEGRGQVQQTTREEPNQREEDHK----------EKLDHPVDNIDKNP-
        I S+  A  EFVC MCNV   S+I FN+H+ GKKH                 ++G G+ +Q +      + +  K          +KL    D +   P 
Subjt:  IGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHK---------------AKEGRGQVQQTTREEPNQREEDHK----------EKLDHPVDNIDKNP-

Query:  --VVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQ
             +N   K+ C +C+V      V  +H  G+KH A L++   Q
Subjt:  --VVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAAAGAGTGAATCCGTCATCGTCTACAGCTTTACGGCGGTTCCAGGTTCCAATACCGAAGCCTGAGGAGGATGAAATGAACAAGCTAATCACTCTGGAGAGGCC
AGACCCTAGAAAATTTATCCGGAAGAGAAAAGCAGAGATATCAAGAAGCAGGAGGAGGGATGAAAGAGATCAAAGTCAAACAATCATTCCAACTTCTTGGATTGGTTCAA
AGAAATTAGCAAAAGACGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCACACATAAATGGGAAGAAACACAAGGCCAAAGAGGGC
CGTGGCCAAGTACAACAAACAACTCGTGAGGAACCCAACCAAAGGGAAGAAGATCATAAAGAAAAATTAGACCACCCAGTGGACAACATAGATAAAAATCCAGTCGTTGA
GAAGAACAAGAGGCTTAAATTCCGGTGTGAAATTTGCGACGTCGTAACCTCTTGTATGGCTGTTATGGTCTCACACAACAATGGAAGAAAGCATAAGGCTCGCCTTTCGA
AACTTTCTCAACAAAAAGGACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGAAAGAGTGAATCCGTCATCGTCTACAGCTTTACGGCGGTTCCAGGTTCCAATACCGAAGCCTGAGGAGGATGAAATGAACAAGCTAATCACTCTGGAGAGGCC
AGACCCTAGAAAATTTATCCGGAAGAGAAAAGCAGAGATATCAAGAAGCAGGAGGAGGGATGAAAGAGATCAAAGTCAAACAATCATTCCAACTTCTTGGATTGGTTCAA
AGAAATTAGCAAAAGACGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCACACATAAATGGGAAGAAACACAAGGCCAAAGAGGGC
CGTGGCCAAGTACAACAAACAACTCGTGAGGAACCCAACCAAAGGGAAGAAGATCATAAAGAAAAATTAGACCACCCAGTGGACAACATAGATAAAAATCCAGTCGTTGA
GAAGAACAAGAGGCTTAAATTCCGGTGTGAAATTTGCGACGTCGTAACCTCTTGTATGGCTGTTATGGTCTCACACAACAATGGAAGAAAGCATAAGGCTCGCCTTTCGA
AACTTTCTCAACAAAAAGGACTATGA
Protein sequenceShow/hide protein sequence
MNERVNPSSSTALRRFQVPIPKPEEDEMNKLITLERPDPRKFIRKRKAEISRSRRRDERDQSQTIIPTSWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHKAKEG
RGQVQQTTREEPNQREEDHKEKLDHPVDNIDKNPVVEKNKRLKFRCEICDVVTSCMAVMVSHNNGRKHKARLSKLSQQKGL