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Chy2G044040 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G044040
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH02:25614238..25615039
RNA-Seq ExpressionChy2G044040
SyntenyChy2G044040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035099.1 hypothetical protein E6C27_scaffold57G001740 [Cucumis melo var. makuwa]2.06e-4482.76Show/hide
Query:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPHE-LAGTKISLKRLRSSRDSIRKR
        MAD KPLHVLLIMA LLLLLASQLN IFA TDS TP NLPQQT N+E RLPSSDPHLSPPLSNQRAARNN TKAH  + LAGT++SLKRLRS+RDSIRKR
Subjt:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPHE-LAGTKISLKRLRSSRDSIRKR

Query:  RRRNHQRAWHRRNYSS
        RRRNH RAWHR +YSS
Subjt:  RRRNHQRAWHRRNYSS
TrEMBL top hitse value%identityAlignment
A0A0A0LTC2 Uncharacterized protein4.0e-4794.83Show/hide
Query:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPHELAGTKISLKRLRSSRDSIRKRR
        MADLKPLHVLLI+A  LL+LASQLNLIFAHTDSSTPSNLPQQTTNEEE LPSSDPHLSPPLSNQRAARNNKTKAHPHELAGTKISLKRLRSSRDSIRKRR
Subjt:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPHELAGTKISLKRLRSSRDSIRKRR

Query:  RRNHQRAWHRRNYSSH
        RRNHQRAW RRNYSSH
Subjt:  RRNHQRAWHRRNYSSH
A0A5D3BAD8 Uncharacterized protein8.6e-3482.76Show/hide
Query:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPH-ELAGTKISLKRLRSSRDSIRKR
        MAD KPLHVLLIMA LLLLLASQLN IFA TDS TP NLPQQT N +ERLPSSDPHLSPPLSNQRAARNN TKAH   +LAGT++SLKRLRS+RDSIRKR
Subjt:  MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPH-ELAGTKISLKRLRSSRDSIRKR

Query:  RRRNHQRAWHRRNYSS
        RRRNH RAWH R+YSS
Subjt:  RRRNHQRAWHRRNYSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATCTTAAACCCCTCCATGTTCTCTTAATAATGGCGTTTCTTCTTCTTCTTCTGGCCTCGCAACTCAACTTGATTTTCGCTCATACAGATTCATCAACTCCATC
CAATCTTCCCCAACAAACAACCAACGAAGAAGAACGCCTACCTTCCTCCGATCCACATCTTTCTCCACCTCTTAGCAACCAAAGAGCTGCTCGAAACAATAAAACCAAAG
CGCATCCTCATGAACTCGCTGGTACTAAAATCTCTCTCAAACGCTTGAGATCTAGTCGTGATTCGATTAGGAAACGTCGAAGACGCAATCACCAACGTGCTTGGCATCGT
CGCAACTATTCCTCCCATGTGAGAAAAAGTGTCAAGAAGAAAGATGGCTTGAATAACCATGTTATCGACACGGTTAACATTGAACTTCACTTTCTCTCTACTATAACTGT
GTACCAGACCAAGTTGAGCCTTCTCCAAATCTCCTTGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATCTTAAACCCCTCCATGTTCTCTTAATAATGGCGTTTCTTCTTCTTCTTCTGGCCTCGCAACTCAACTTGATTTTCGCTCATACAGATTCATCAACTCCATC
CAATCTTCCCCAACAAACAACCAACGAAGAAGAACGCCTACCTTCCTCCGATCCACATCTTTCTCCACCTCTTAGCAACCAAAGAGCTGCTCGAAACAATAAAACCAAAG
CGCATCCTCATGAACTCGCTGGTACTAAAATCTCTCTCAAACGCTTGAGATCTAGTCGTGATTCGATTAGGAAACGTCGAAGACGCAATCACCAACGTGCTTGGCATCGT
CGCAACTATTCCTCCCATGTGAGAAAAAGTGTCAAGAAGAAAGATGGCTTGAATAACCATGTTATCGACACGGTTAACATTGAACTTCACTTTCTCTCTACTATAACTGT
GTACCAGACCAAGTTGAGCCTTCTCCAAATCTCCTTGCTGTAA
Protein sequenceShow/hide protein sequence
MADLKPLHVLLIMAFLLLLLASQLNLIFAHTDSSTPSNLPQQTTNEEERLPSSDPHLSPPLSNQRAARNNKTKAHPHELAGTKISLKRLRSSRDSIRKRRRRNHQRAWHR
RNYSSHVRKSVKKKDGLNNHVIDTVNIELHFLSTITVYQTKLSLLQISLL