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Chy2G044300 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G044300
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationchrH02:25842974..25843241
RNA-Seq ExpressionChy2G044300
SyntenyChy2G044300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589745.1 hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia]2.81e-2373.2Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS--------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SI S+ VV FLL  SVIVS++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSGS        SS+SSS+SSSS SGS AGSEAGSYAGS AGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS--------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

XP_008443812.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]7.59e-3391.4Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSG----SGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR VAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL GSGSG     GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSG----SGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]1.42e-2776.77Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS----------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR+V+++  LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGLGGSGSGSGS          SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS----------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

XP_023515818.1 putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo]1.93e-2882.42Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS--SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR+V+++  LL +SVIVSESR+AR DLGLDLGG+G+G+GTGVGLGLGGSGSGSGS  SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS--SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]6.87e-2979.8Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS----------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR+V ++ FLLGVSVIVSE RVAR +LGLDLGG+GLGVGTGVGLGLGGSGSGSGS          SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGS----------SSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

TrEMBL top hitse value%identityAlignment
A0A1S3B8Y8 putative glycine-rich cell wall structural protein 12.7e-2491.4Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGS----GSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR VAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL GS    GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGS----GSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like2.3e-2076.77Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLG----------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR+V+++  LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGLG          GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLG----------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

A0A6J1E2L1 cell wall protein IFF6-like isoform X12.0e-1669.31Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG------------SSSASSSHSSSSSSGSDAGSEAGSYAGSYAG
        M SI S+ VV FLL  SVI+S++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSG            SSS+SSS+SSSS SGS AGSEAGSYAGS AG
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG------------SSSASSSHSSSSSSGSDAGSEAGSYAGSYAG

Query:  S
        S
Subjt:  S

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X32.0e-1669.31Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG------------SSSASSSHSSSSSSGSDAGSEAGSYAGSYAG
        M SI S+ VV FLL  SVI+S++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSG            SSS+SSS+SSSS SGS AGSEAGSYAGS AG
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG------------SSSASSSHSSSSSSGSDAGSEAGSYAGSYAG

Query:  S
        S
Subjt:  S

A0A6J1JHN1 glycine-rich cell wall structural protein 2-like isoform X32.4e-1772Show/hide
Query:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLG-----------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        M SIR+V+++  LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGLG           GSGSGSGSSS+SSS+SSSSSSGS AGSEAGSYAGS AGS
Subjt:  MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLG-----------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein2.3e-1260.87Show/hide
Query:  FLLGVSVI-----VSESRVARKDLGLDLGGMGLGVGTGVGLGLG---------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        FLLG+ VI     ++ESR+ARKDLG+DLGG+G+G+G G+G+GLG         GSGSGSGS S+SSS SSSSSS S +G  AGS AGS+AGS
Subjt:  FLLGVSVI-----VSESRVARKDLGLDLGGMGLGVGTGVGLGLG---------GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

AT4G30460.1 glycine-rich protein3.4e-1664.95Show/hide
Query:  SVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG----------SSSASSSHSSSSSS---GSDAGSEAGSYAGSYAGS
        S+ ++T +L  SV+VSESRVARKDLGLDLGG+G G+G G+G+G GGSGSG+G          SSS+SSS SSSSSS   G DAGSEAGSYAGS+AGS
Subjt:  SVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSG----------SSSASSSHSSSSSS---GSDAGSEAGSYAGSYAGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCATTAGAAGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGCGTGGCTAGAAAAGACTTGGGCCTCGACCTCGGAGGAAT
GGGACTTGGTGTTGGAACGGGAGTGGGCTTGGGCTTAGGTGGAAGTGGGTCTGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCAAGCTCTGGCTCCG
ATGCAGGGTCTGAAGCCGGCTCCTACGCTGGCTCTTATGCCGGATCAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCCATTAGAAGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGCGTGGCTAGAAAAGACTTGGGCCTCGACCTCGGAGGAAT
GGGACTTGGTGTTGGAACGGGAGTGGGCTTGGGCTTAGGTGGAAGTGGGTCTGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCAAGCTCTGGCTCCG
ATGCAGGGTCTGAAGCCGGCTCCTACGCTGGCTCTTATGCCGGATCAG
Protein sequenceShow/hide protein sequence
MVSIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLGGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSX