; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G044390 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G044390
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiontranscription factor IBH1-like 1
Genome locationchrH02:25939205..25940555
RNA-Seq ExpressionChy2G044390
SyntenyChy2G044390
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035130.1 transcription factor IBH1-like [Cucumis melo var. makuwa]5.16e-9697.45Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

TYJ95949.1 transcription factor IBH1-like [Cucumis melo var. makuwa]3.12e-9798.73Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_004149880.1 transcription factor IBH1-like 1 [Cucumis sativus]2.70e-11897.84Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQNSNSLKQEF KKW+MGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VAN VLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_008443801.1 PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]6.36e-11796.76Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQN NSLKQEFLKKW+MGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_038879866.1 transcription factor IBH1-like 1 [Benincasa hispida]9.56e-9282.54Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSW
        M+N +SLK+EFLKKW+ GLQIYTT+ NENMTV ERKTAIKLSADIALASSRNCATRWSRAVIA SSVDNRS  VA+ VLGR +CERVKQISN K+TRSSW
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSW

Query:  SSGKIVKRSRRVWRRRRRRNKCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SSG I+KRSRRV   RRRRNKCM   AA ++A+RLV KRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LATAYNPSSSS
Subjt:  SSGKIVKRSRRVWRRRRRRNKCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ3 Uncharacterized protein1.7e-9097.84Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQNSNSLKQEF KKW+MGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VAN VLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A1S3B8V1 uncharacterized protein LOC1034873051.9e-8996.76Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQN NSLKQEFLKKW+MGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A5A7SVT7 Transcription factor IBH1-like1.4e-7397.45Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A5D3BAB1 Transcription factor IBH1-like1.7e-7498.73Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A6J1JMR3 transcription factor IBH1-like 14.1e-6076.27Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        M+N +SLK++FLKKW+MGLQIYTTTN NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + S LVAN +LGR +CER+KQ S+ KITRSSWS
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT
        SGKI+KRSRRV RR++ R    AA  IARRLVQKRT+ LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LAT
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT

SwissProt top hitse value%identityAlignment
Q7XR02 Transcription factor IBH18.9e-0447.83Show/hide
Query:  RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
        R + LR LVPGG  M+  SL+EET DY+ +L+AQV +M+ L   ++
Subjt:  RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN

Q9M0B9 Transcription factor IBH1-like 13.4e-2743.58Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++ + LV   + G     + + + N K+ + +  
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

Q9SKX1 Transcription factor IBH11.8e-0437.23Show/hide
Query:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP
        S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG  M+   L+EET  Y+  L  QV VM+ L    +P
Subjt:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 11.3e-0537.23Show/hide
Query:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP
        S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG  M+   L+EET  Y+  L  QV VM+ L    +P
Subjt:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP

AT4G30410.1 sequence-specific DNA binding transcription factors2.4e-2843.58Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++ + LV   + G     + + + N K+ + +  
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

AT4G30410.2 sequence-specific DNA binding transcription factors2.4e-2843.58Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++ + LV   + G     + + + N K+ + +  
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

AT5G57780.1 EXPRESSED IN: 18 plant structures1.2e-1940.33Show/hide
Query:  MQNSNSLKQEFLKKWIMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSW
        M   N +KQEF+KKWI  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA+I+RS                       + +N  + R   
Subjt:  MQNSNSLKQEFLKKWIMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSW

Query:  SSGKIVKRSRRVWRRR---RRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFLA
           +I+K++R   + R    RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +A
Subjt:  SSGKIVKRSRRVWRRR---RRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATATTATTGGATTTTAGTTGAAGATGCTAAAACATCAACCCATGTAAAAGTGGACTTAAGAATGCAGAATTCCAATTCGTTAAAACAAGAATTTTTGAAGAAATG
GATTATGGGTCTTCAAATATACACAACCACAAACGAAAACATGACGGTCACAGAGCGAAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACT
GCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACTGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAA
ATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGT
GACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATA
TGTCAGCTCTTCAGGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATATTATTGGATTTTAGTTGAAGATGCTAAAACATCAACCCATGTAAAAGTGGACTTAAGAATGCAGAATTCCAATTCGTTAAAACAAGAATTTTTGAAGAAATG
GATTATGGGTCTTCAAATATACACAACCACAAACGAAAACATGACGGTCACAGAGCGAAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACT
GCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACTGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAA
ATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGT
GACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATA
TGTCAGCTCTTCAGGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA
Protein sequenceShow/hide protein sequence
MRYYWILVEDAKTSTHVKVDLRMQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQ
ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS