; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G044960 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G044960
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationchrH02:26364175..26367040
RNA-Seq ExpressionChy2G044960
SyntenyChy2G044960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058273.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]2.58e-9090.21Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPK--RNPCPLDLNNNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVRV+QNKQ LFVLFGPWRKQPKPKPK  +NPCPLDLN NNERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPK--RNPCPLDLNNNNERLRF

Query:  DSCGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI
        DSCGSQCELMAESSCK +SSP G SSG WRLGCGPWRINPIKI
Subjt:  DSCGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI

XP_004146363.1 uncharacterized protein LOC101210202 [Cucumis sativus]3.92e-9996.45Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVR +QNKQPLFVLFGPWRKQPKPKPK+NPCPLDLNN NERLRFDS
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS

Query:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI
        CGSQCELMAESSCKGKS+PAGGSSGHWRLGCGPWRINPIKI
Subjt:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]7.13e-4157.72Show/hide
Query:  SSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCG
        SSR +YYRRTTEGVPFQWEMQPGTPK+ PP TE +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K K++ C  D   +  R RF SCG
Subjt:  SSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCG

Query:  SQCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV
        SQCE + +S C+ KSS        PA  SS H RLGCGPWRINP++I +
Subjt:  SQCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV

XP_023530969.1 uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]1.47e-4057.33Show/hide
Query:  SSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCG
        SSR +YYRRTTEGVPFQWEMQPGTPK+  P TE +   I+PPPA LSL   KP R  Q KQ LF+LF PWRKQ   K K++ C  D   +  R RF SCG
Subjt:  SSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCG

Query:  SQCELMAESSCKGKSS---------PAGGSSGHWRLGCGPWRINPIKIEV
        SQCE + +S C+ KSS         PA  SS H RLGCGPWRINP++I +
Subjt:  SQCELMAESSCKGKSS---------PAGGSSGHWRLGCGPWRINPIKIEV

XP_038878338.1 uncharacterized protein LOC120070597 [Benincasa hispida]6.03e-7981.56Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKN PPLT+V+ PPISPPPA+LSL LSKP R +QNKQPLFVLFGPW KQ   KPK+NPCPLD NN+ ERLRFDS
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS

Query:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI
        CGS CE M ESSCK KS  A  SSGHWR+GCGPWRINPIKI
Subjt:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein9.9e-7696.45Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVR +QNKQPLFVLFGPWRKQPKPKPK+NPCPLDLNN NERLRFDS
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDS

Query:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI
        CGSQCELMAESSCKGKS+PAGGSSGHWRLGCGPWRINPIKI
Subjt:  CGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI

A0A498HMU4 Uncharacterized protein1.1e-1547.26Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPV---RVIQNKQPLFVLFGP--WRKQPKPKPKRNPCPLDLNNNNERLRF
        SSR YY R+TEGVPF WEMQPGTP+ NPP  E I PPISPPPAVLSLGL KP    ++  NK P   L     W K+ K K +R     +L +N    +F
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPV---RVIQNKQPLFVLFGP--WRKQPKPKPKRNPCPLDLNNNNERLRF

Query:  DS---CGSQCELMAESSCKGKSSPAGGSSGHWRLG-CGPWRINPIK
        D    C S  E MA SS    SS +  SS  +  G C   R  P +
Subjt:  DS---CGSQCELMAESSCKGKSSPAGGSSGHWRLG-CGPWRINPIK

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like8.9e-6990.21Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQ--PKPKPKRNPCPLDLNNNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVRV+QNKQ LFVLFGPWRKQ  PKPKPK+NPCPLDLN NNERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQ--PKPKPKRNPCPLDLNNNNERLRF

Query:  DSCGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI
        DSCGSQCELMAESSCK +SSP G SSG WRLGCGPWRINPIKI
Subjt:  DSCGSQCELMAESSCKGKSSPAGGSSGHWRLGCGPWRINPIKI

A0A6J1EQV3 uncharacterized protein LOC1114366861.3e-3056.08Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCGS
        S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K +++ C  D    + R RF SCGS
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCGS

Query:  QCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV
        QCE + +S C+ KSS        PA  SS H RLGCGPWRINP++I +
Subjt:  QCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV

A0A6J1KZJ1 uncharacterized protein LOC1114996804.3e-3156.76Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCGS
        S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K K++ C  D    + R RF SCGS
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCGS

Query:  QCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV
        QCE + +S C+ KSS        PA  SS H RLGCGPWRINP++I +
Subjt:  QCELMAESSCKGKSS--------PAGGSSGHWRLGCGPWRINPIKIEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)3.8e-1159.65Show/hide
Query:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKP
        +SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP
Subjt:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKP

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B3.8e-1159.65Show/hide
Query:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKP
        +SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP
Subjt:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKP

AT5G01790.1 unknown protein5.8e-0447.73Show/hide
Query:  FYYRRTTEGVPFQWEMQPGTPKNNPPLTEV-ILPPISPPPAVLS
        +YY      VPF+WE  PGTPK+  P +E+  LPP++PPP+  S
Subjt:  FYYRRTTEGVPFQWEMQPGTPKNNPPLTEV-ILPPISPPPAVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACCACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCGCTCACGGAGGTGAT
TCTGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGTTATTCAGAATAAACAACCGTTGTTTGTGTTATTTGGGCCGTGGAGGA
AGCAGCCCAAGCCCAAGCCCAAGAGGAATCCCTGTCCGTTGGATCTTAATAATAACAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCAGAA
TCTTCATGCAAAGGAAAATCTTCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGAGGTACCATTTGTGGA
GAATGAAATGGGGAAGAAAAAGGTTAACATAGAAATAGATAAGGAGAGTATATCAAAGGGGGAGACATTCAAGGGATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACCACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCGCTCACGGAGGTGAT
TCTGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGTTATTCAGAATAAACAACCGTTGTTTGTGTTATTTGGGCCGTGGAGGA
AGCAGCCCAAGCCCAAGCCCAAGAGGAATCCCTGTCCGTTGGATCTTAATAATAACAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCAGAA
TCTTCATGCAAAGGAAAATCTTCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGAGGTACCATTTGTGGA
GAATGAAATGGGGAAGAAAAAGGTTAACATAGAAATAGATAAGGAGAGTATATCAAAGGGGGAGACATTCAAGGGATTCTAA
Protein sequenceShow/hide protein sequence
MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRVIQNKQPLFVLFGPWRKQPKPKPKRNPCPLDLNNNNERLRFDSCGSQCELMAE
SSCKGKSSPAGGSSGHWRLGCGPWRINPIKIEVPFVENEMGKKKVNIEIDKESISKGETFKGF