CuGenDBv2

Gene ID	Chy2G045980
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Microbial collagenase
Genome location	chrH02:27275450..27277247
RNA-Seq Expression	Chy2G045980
Synteny	Chy2G045980
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK28472.1 uncharacterized protein E5676_scaffold629G001050 [Cucumis melo var. makuwa]

8.90e-170

91.88

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSS SLTRFASSSSNNSLNP KL LKVPFNA S+S ISFKSSN PSIYRFPS KTCA LDGKDPNGATPVLV+        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPA E+LSA SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

XP_004137329.1 uncharacterized protein LOC101217184 [Cucumis sativus]

4.64e-174

94.46

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSSFSLTRFA SSSNNSL PPK+L KVP NANSQSSISFKSSNTPSIYRFPS KTCAALDGKDPNGATPVLVE        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPAEE+LSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

XP_008453454.1 PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo]

4.61e-172

92.62

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSS SLTRFASSSSNNSLNPPKL LKVPFNA S+S ISFKSSN PSIYRFPS KTCA LDGKDPNGATPVLV+        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPAEE+LSA SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

XP_023005200.1 uncharacterized protein LOC111498299 [Cucurbita maxima]

8.05e-138

77.32

Show/hide

Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLV------EIVNEEVEKSVK
        M+SL V  S+  S   + FASSSSNNSLNPPK+  K P NA +   IS KSSN PS  RFP  K  A L  KDPNGA P+ V       IV+EEVEKSVK
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLV------EIVNEEVEKSVK

Query:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT
        VLK+AAKTR+V AEE+LSA SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRIENGVFLGPIGSLTFEGR+SWK 
Subjt:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT

Query:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Subjt:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

XP_038879808.1 uncharacterized protein LOC120071551 isoform X1 [Benincasa hispida]

1.15e-160

88.48

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE------IVNEEVEKSVK
        MSSLTVAASS SS  LT+FASSSSNN LNP KL LK+P NAN+Q +ISFKSSN PSI R P  KTCAALD KDPNGATPVLVE      IVNEEVEKSVK
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE------IVNEEVEKSVK

Query:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT
        VLKNAAKTRKV AEE+LSA SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGR+SWKT
Subjt:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT

Query:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        RILAFIFER+RIKIGPLNPLEISLGQKEEREPS KDP FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPV7 Uncharacterized protein

1.7e-135

94.46

Show/hide

Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSSFSLTRFA SSSNNSL PPK +LKVP NANSQSSISFKSSNTPSIYRFPS KTCAALDGKDPNGATPVLVE        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPAEE+LSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

A0A1S3BXG3 uncharacterized protein LOC103494159

5.4e-134

92.62

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSS SLTRFASSSSNNSLNPPKL LKVPFNA S+S ISFKSSN PSIYRFPS KTCA LDGKDPNGATPVLV+        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPAEE+LSA SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

A0A5A7USJ0 Uncharacterized protein

5.4e-134

92.62

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSS SLTRFASSSSNNSLNPPKL LKVPFNA S+S ISFKSSN PSIYRFPS KTCA LDGKDPNGATPVLV+        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPAEE+LSA SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

A0A5D3DY46 Uncharacterized protein

3.0e-132

91.88

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS
        MSSLTVAASSFSS SLTRFASSSSNNSLNP KL LKVPFNA S+S ISFKSSN PSIYRFPS KTCA LDGKDPNGATPVLV+        IVNEEVEKS
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVE--------IVNEEVEKS

Query:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
        VKVLKNAAKTRKVPA E+LSA SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW
Subjt:  VKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSW

Query:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Subjt:  KTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

A0A6J1KWT0 uncharacterized protein LOC111498299

6.7e-108

77.32

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Query:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLV------EIVNEEVEKSVK
        M+SL V  S+  S   + FASSSSNNSLNPPK+  K P NA +   IS KSSN PS  RFP  K  A L  KDPNGA P+ V       IV+EEVEKSVK
Subjt:  MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLV------EIVNEEVEKSVK

Query:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT
        VLK+AAKTR+V AEE+LSA SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRIENGVFLGPIGSLTFEGR+SWK 
Subjt:  VLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKT

Query:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
        RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Subjt:  RILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G18060.1 unknown protein

9.0e-81

72.96

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Query:  AALDGKDPNGATPVLVEIVNEEVEKSVKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFD
        A +DG++     P   +I N++V +SV VLK AAKTRKV A+EIL+AFS +EKAK+DPS F  TLGG  SPGRTWMLIFTAEKKL KGRYFP+TA+QRFD
Subjt:  AALDGKDPNGATPVLVEIVNEEVEKSVKVLKNAAKTRKVPAEEILSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFD

Query:  AAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEE-REPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRV
        AAGKRIENGV+LGP G+LTFEGR SWK RILAF+FE++RIKIGPL+PLE SLG+K+   EPS KDP FIWFY+DEEIAVARGRSGGTAFWCRCRR+
Subjt:  AAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEE-REPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTTCCAGTTCATCCAACAACTCTCTCAATCCCCCAAAACTCCTTCTCAAAGT
CCCTTTTAACGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTTAAAACCTGCGCAGCTTTAGACGGAAAAGACC
CAAATGGAGCGACCCCAGTTCTGGTTGAGATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAATT
TTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGC
TGAGAAAAAATTGAAAAAGGGTCGGTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCT
TAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAA
AAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCG
GTGTCGCCGTGTCAATACTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSLTVAASSFSSFSLTRFASSSSNNSLNPPKLLLKVPFNANSQSSISFKSSNTPSIYRFPSFKTCAALDGKDPNGATPVLVEIVNEEVEKSVKVLKNAAKTRKVPAEEI
LSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQ
KEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT

Chy2G045980 (gene) of Cucumber (hystrix) v1 genome