; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G046360 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G046360
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionAT-rich interactive domain protein
Genome locationchrH02:27545219..27546125
RNA-Seq ExpressionChy2G046360
SyntenyChy2G046360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138240.1 uncharacterized protein LOC101218989 [Cucumis sativus]9.45e-13498Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEE RNRTA VEMGSPVVENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
        GVVFDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE

XP_008453388.1 PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo]1.67e-13094.55Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTP-SNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRTP SNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTA +EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTP-SNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE

Query:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_022134616.1 uncharacterized protein LOC111006843 [Momordica charantia]1.34e-11384.58Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRTGRFDSKNR+SSTT KEQEEEEEERNR A +E   P VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSL
        GV FDVDENLPELPGLQPDFWEGP+WD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+LE PEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

XP_022987248.1 uncharacterized protein LOC111484859 [Cucurbita maxima]5.93e-10983.66Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAVVEMGSPVVEN
        M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR GR DSKNR+SST+ KEQEE EEEERNR A       + EN
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAVVEMGSPVVEN

Query:  AGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPS
        AGV FDVDENLPELPGLQPDFWEG QWD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EILE PEASNPDVFESNPTEVAPS
Subjt:  AGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_038876354.1 uncharacterized protein LOC120068690 [Benincasa hispida]1.52e-11487.06Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        M LTITNGGAT GT GGILYR+ TRTPSN FL RRNALF PSKEARTL++VQAKKSSFRTGRFD KNR+SSTT   QE+EEEERNRTA +   SP VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSL
        GV FDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFK+TPAYKESVQTREILE PEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A0A0LPS1 Uncharacterized protein6.4e-10398Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQ EEEEERNRTA VEMGSPVVENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
        GVVFDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE

A0A1S3BW57 uncharacterized protein LOC1034941201.7e-10094.55Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTA +EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE

Query:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A5A7UV79 Putative AT-rich interactive domain-containing protein 5A1.7e-10094.55Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTA +EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAVVEMGSPVVE

Query:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A6J1BYA9 uncharacterized protein LOC1110068431.3e-8784.58Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRTGRFDSKNR+SSTT KEQEEEEEERNR A +E   P VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL
        GV FDVDENLPELPGLQPDFWEGP+WD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L EPEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

A0A6J1JIX0 uncharacterized protein LOC1114848596.7e-8483.66Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAVVEMGSPVVEN
        M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR GR DSKNR+SST+ KEQEE EEEERNR A       + EN
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAVVEMGSPVVEN

Query:  AGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS
        AGV FDVDENLPELPGLQPDFWEG QWD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPEASNPDVFESNPTEVAPS
Subjt:  AGVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73885.1 unknown protein3.0e-2842.29Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA
        M LT+++GG      GG   R    T S+   F    L +    +RT    +  +       FD +N  S   I    +E+ +R        G P     
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENA

Query:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASN-PDVFESNPTEVAPS
          + D       LPGL+PD +EG +WD LGFF++YLWAFGI+FA+I+ G+A  TYNEGATDFKETP YKE++Q+R++L E E+SN  DVFESNPTEVAP+
Subjt:  GVVFDVDENLPELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASN-PDVFESNPTEVAPS

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGC
GCTTTTCCATCCCTCAAAAGAAGCCCGCACTCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAA
TCAAGGAACAGGAAGAAGAAGAAGAAGAACGAAATCGGACGGCCGTGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGATGTGGATGAGAATTTG
CCGGAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCCTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGC
ATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAA
ACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGC
GCTTTTCCATCCCTCAAAAGAAGCCCGCACTCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAA
TCAAGGAACAGGAAGAAGAAGAAGAAGAACGAAATCGGACGGCCGTGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGATGTGGATGAGAATTTG
CCGGAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCCTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGC
ATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAA
ACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA
Protein sequenceShow/hide protein sequence
MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAVVEMGSPVVENAGVVFDVDENL
PELPGLQPDFWEGPQWDALGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE