; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G046630 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G046630
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box domain-containing protein
Genome locationchrH02:27726837..27728039
RNA-Seq ExpressionChy2G046630
SyntenyChy2G046630
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653057.1 hypothetical protein Csa_020016 [Cucumis sativus]6.60e-1147.31Show/hide
Query:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC
        ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDYAS+ Q Q L  A L+ T D  ++    + K+ C
Subjt:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC

KGN63785.1 hypothetical protein Csa_013046 [Cucumis sativus]6.86e-5398.89Show/hide
Query:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA
        MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFK+KCNA
Subjt:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA

XP_004138336.1 uncharacterized protein LOC101222225 [Cucumis sativus]5.30e-4588.89Show/hide
Query:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA
        MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA QFQCLT ALLICT+DEAIS +DDS KV CNA
Subjt:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]1.53e-0647.14Show/hide
Query:  RLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCN
        RLP  I   IFSKL IS+LP CR+VCKTWN+ VL+YAS+ +F   T  L +   DE  + +       CN
Subjt:  RLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCN

XP_011648473.2 F-box protein At3g07870 [Cucumis sativus]5.99e-1147.31Show/hide
Query:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC
        ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDYAS+ Q Q L  A L+ T D  ++    + K+ C
Subjt:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC

TrEMBL top hitse value%identityAlignment
A0A0A0LPC6 Uncharacterized protein6.5e-1451.72Show/hide
Query:  KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC
        +ME M    ++M +DWG+ LP  I  TIFSKLVIS+LP CR VCKTWNH VL YAS+ Q Q LT A L+ T D  ++    + K+ C
Subjt:  KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC

A0A0A0LPH0 Uncharacterized protein5.5e-4598.89Show/hide
Query:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA
        MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFK+KCNA
Subjt:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA

A0A0A0LRY6 Uncharacterized protein1.0e-3888.89Show/hide
Query:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA
        MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA QFQCLT ALLICT+DEAIS +DDS KV CNA
Subjt:  MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNA

A0A0A0LUP7 F-box domain-containing protein5.5e-1354.55Show/hide
Query:  KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAIS
        +ME M    ++M +DWG+ LP  I   IFSKLVIS+LP CR VCKTWNH VL YAS+ Q Q LT A L+ T D+ ++
Subjt:  KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAIS

A0A0A0LWG1 F-box domain-containing protein3.3e-1047.31Show/hide
Query:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC
        ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDYAS+ Q Q L  A L+ T D  ++    + K+ C
Subjt:  MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTCATCTCCGA
TTTACCCATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATG
ATGAAGCTATTAGCATCGTCGATGACAGTTTTAAAGTTAAATGCAATGCATGAATTTTGATTCCATAAAGCATTTGCATGTAAATTTGGATTTGGATTTGGAATTGATTA
AATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAGTCAATGCAATGGGTTGTTGTACATTATCACCGATGATTATGAATATCATGGTATGATTAAT
CATGAAATATTTAATCCTATGACTAATGAGTTCCTTCAAGTTCCTTGGACGGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAA
ATTGTTTAGAGTTAGAACCACTTTGCCTAAAGAAGCATTTAGGAAAAGAATGGAAATGGATGTTTTGAGGTTTGGCAACGCAACAAATGGAGATCCCTACCCTTTCTGCC
TTCATCATCAGATCACAAATTATCTCACAAATTTGTTTGTAGTGCGTATTTGAATGGAGTCATCGGTTGGTTGGAAAAACTAAAACGTGAAAGAAACAAGGTTGTCATAT
ATGCTCTTGATGTTGAAACAAAATGATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGGTTAACCAAGAGACCTTGAACATTTATAATTTTAATGAGACCATTTATGCA
ACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAACAAATTCATGGAGTATTCAAGAAGTACTTAATGATGACACATCAAA
TGATCATTGGAGAGACATTACAATCATCGAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGATGAGGA
AGAAAATCGTACCATGGTATCAAGAGAAAAAGAAATTTGAAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAAGATTTTGACCGGAGATAATCAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTCATCTCCGA
TTTACCCATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATG
ATGAAGCTATTAGCATCGTCGATGACAGTTTTAAAGTTAAATGCAATGCATGAATTTTGATTCCATAAAGCATTTGCATGTAAATTTGGATTTGGATTTGGAATTGATTA
AATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAGTCAATGCAATGGGTTGTTGTACATTATCACCGATGATTATGAATATCATGGTATGATTAAT
CATGAAATATTTAATCCTATGACTAATGAGTTCCTTCAAGTTCCTTGGACGGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAA
ATTGTTTAGAGTTAGAACCACTTTGCCTAAAGAAGCATTTAGGAAAAGAATGGAAATGGATGTTTTGAGGTTTGGCAACGCAACAAATGGAGATCCCTACCCTTTCTGCC
TTCATCATCAGATCACAAATTATCTCACAAATTTGTTTGTAGTGCGTATTTGAATGGAGTCATCGGTTGGTTGGAAAAACTAAAACGTGAAAGAAACAAGGTTGTCATAT
ATGCTCTTGATGTTGAAACAAAATGATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGGTTAACCAAGAGACCTTGAACATTTATAATTTTAATGAGACCATTTATGCA
ACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAACAAATTCATGGAGTATTCAAGAAGTACTTAATGATGACACATCAAA
TGATCATTGGAGAGACATTACAATCATCGAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGATGAGGA
AGAAAATCGTACCATGGTATCAAGAGAAAAAGAAATTTGAAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAAGATTTTGACCGGAGATAATCAAGATTGA
Protein sequenceShow/hide protein sequence
MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKVKCNAILIP*SICM*IWIWIWN*LN
LHRYCLMAIGVSI*VNAMGCCTLSPMIMNIMV*LIMKYLIL*LMSSFKFLGRMNIDMMRLDLVVALLQNNTNCLELEPLCLKKHLGKEWKWMFGLATQQMEIPTLSAFII
RSQIISQICL*CVFEWSHRLVGKTKTKKQGCHICS*C*NKMI*IEYYFGSWPG*PRDLEHL*F**DHLCNLHNFGRCNLVPDSNLEDARNKFMEYSRST***HIK*SLER
HYNHRRSL*R*RAHGQFSIFLLL*FYLWEDEEENRTMVSREKEIKIESLNFGSLSKILTGDNQD*