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Chy2G046770 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G046770
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchrH02:27826413..27827823
RNA-Seq ExpressionChy2G046770
SyntenyChy2G046770
Gene Ontology termsGO:0009786 - regulation of asymmetric cell division (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058016.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.83e-1694.87Show/hide
Query:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVT
        MEVQKGWQK IRCKHEGGN GDYVFPAVISEPLIAQPVT
Subjt:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVT

KAE8652447.1 hypothetical protein Csa_014115 [Cucumis sativus]2.61e-2791.23Show/hide
Query:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQRPEASSSREGAGYS
        MEVQKGWQK IRCKHEGGNYGDYVFPAVISEPL+AQPVTPVLQ  EASSSRE AGYS
Subjt:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQRPEASSSREGAGYS

KAG6587606.1 hypothetical protein SDJN03_16171, partial [Cucurbita argyrosperma subsp. sororia]2.07e-0454.76Show/hide
Query:  EVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQ
        E QK W+   R K EG N G YVFPA ISE LIAQP   +++
Subjt:  EVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQ

TYJ98239.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.36e-1594.59Show/hide
Query:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQP
        MEVQKGWQK IRCKHEGGNYGDYV PAVISEPLIAQP
Subjt:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQP

TrEMBL top hitse value%identityAlignment
A0A5A7UV29 Retrovirus-related Pol polyprotein from transposon TNT 1-946.8e-1394.87Show/hide
Query:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVT
        MEVQKGWQK IRCKHEGGN GDYVFPAVISEPLIAQPVT
Subjt:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVT

A0A5D3BGS8 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-1294.59Show/hide
Query:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQP
        MEVQKGWQK IRCKHEGGNYGDYV PAVISEPLIAQP
Subjt:  MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCCAGAAAGGATGGCAAAAGCCGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTATTGCCCAACC
TGTGACACCAGTTTTGCAGCGGCCAGAAGCGTCGTCGAGCAGGGAGGGGGCGGGTTACAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCCAGAAAGGATGGCAAAAGCCGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTATTGCCCAACC
TGTGACACCAGTTTTGCAGCGGCCAGAAGCGTCGTCGAGCAGGGAGGGGGCGGGTTACAGTTAA
Protein sequenceShow/hide protein sequence
MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQRPEASSSREGAGYS