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Chy2G046880 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G046880
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationchrH02:27919762..27920861
RNA-Seq ExpressionChy2G046880
SyntenyChy2G046880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]3.27e-5292.86Show/hide
Query:  DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGLYLLLGMDGPWERHNASALLVSLTQVIF
        DTGPGPYQV PP CDPMQHGQTQPYPPIVPPQGETKS+TVPPSMKTKFRGDGFCRGLYLLLGM+GPWERH ASAL+VSLTQVIF
Subjt:  DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGLYLLLGMDGPWERHNASALLVSLTQVIF

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]3.83e-5372.36Show/hide
Query:  MSCTIVTLEKIEVYTKDVSIKIAPPFDFMELFPLKQLG----------------------------DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE
        MSCTIVTLEKIEVYTKDVSIKIAPPFDFM++ PL+ +G                            DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE
Subjt:  MSCTIVTLEKIEVYTKDVSIKIAPPFDFMELFPLKQLG----------------------------DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE

Query:  TKSETVPPSMKTKFRGDGFCRGL
        TKSETVPPSMKTKFRGDGFCRGL
Subjt:  TKSETVPPSMKTKFRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]7.84e-2462.5Show/hide
Query:  MCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL--------YLLLGMDGPWERHNASALLVSLTQVIF
        MCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL        YLLLGM+ P + H A ALLV LTQVIF
Subjt:  MCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL--------YLLLGMDGPWERHNASALLVSLTQVIF

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]3.97e-3365.26Show/hide
Query:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL--------YLLLGMDGPWERHNASALLVSLTQVIF
        Q  DTGPGPY VAPPMCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL        YLLLGM+ P + H A ALLV LTQVIF
Subjt:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL--------YLLLGMDGPWERHNASALLVSLTQVIF

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]2.76e-2373.33Show/hide
Query:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL
        Q  DTGPGPY VAPPMCDPMQHGQ+QPY  I+PPQGETKS+ V P  +T  +GDGFCRGL
Subjt:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein7.3e-4172.36Show/hide
Query:  MSCTIVTLEKIEVYTKDVSIKIAPPFDFMELFPLKQLG----------------------------DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE
        MSCTIVTLEKIEVYTKDVSIKIAPPFDFM++ PL+ +G                            DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE
Subjt:  MSCTIVTLEKIEVYTKDVSIKIAPPFDFMELFPLKQLG----------------------------DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGE

Query:  TKSETVPPSMKTKFRGDGFCRGL
        TKSETVPPSMKTKFRGDGFCRGL
Subjt:  TKSETVPPSMKTKFRGDGFCRGL

A0A5A7UV38 Uncharacterized protein1.8e-3992.86Show/hide
Query:  DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGLYLLLGMDGPWERHNASALLVSLTQVIF
        DTGPGPYQV PP CDPMQHGQTQPYPPIVPPQGETKS+TVPPSMKTKFRGDGFCRGLYLLLGM+GPWERH ASAL+VSLTQVIF
Subjt:  DTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGLYLLLGMDGPWERHNASALLVSLTQVIF

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like2.5e-1773.33Show/hide
Query:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL
        Q  DTGPGPY VAPPMCDPMQHGQ+QPY  I+PPQGETKS+ V P  +T  +GDGFCRGL
Subjt:  QLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTACCATCGTCACCTTGGAGAAAATTGAGGTTTACACTAAAGACGTGTCGATCAAGATCGCTCCTCCATTTGACTTCATGGAATTATTCCCCTTGAAGCAGTT
GGGCGATACTGGACCAGGTCCTTACCAAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGACTCAGCCATACCCTCCAATTGTACCTCCTCAAGGGGAAACTA
AATCTGAAACTGTACCTCCGTCAATGAAAACTAAGTTTAGAGGTGATGGGTTTTGCAGAGGATTATATCTGCTTCTAGGGATGGATGGACCTTGGGAACGGCACAATGCC
TCTGCACTGCTAGTTTCTCTGACACAAGTTATCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTACCATCGTCACCTTGGAGAAAATTGAGGTTTACACTAAAGACGTGTCGATCAAGATCGCTCCTCCATTTGACTTCATGGAATTATTCCCCTTGAAGCAGTT
GGGCGATACTGGACCAGGTCCTTACCAAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGACTCAGCCATACCCTCCAATTGTACCTCCTCAAGGGGAAACTA
AATCTGAAACTGTACCTCCGTCAATGAAAACTAAGTTTAGAGGTGATGGGTTTTGCAGAGGATTATATCTGCTTCTAGGGATGGATGGACCTTGGGAACGGCACAATGCC
TCTGCACTGCTAGTTTCTCTGACACAAGTTATCTTCTAG
Protein sequenceShow/hide protein sequence
MSCTIVTLEKIEVYTKDVSIKIAPPFDFMELFPLKQLGDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGLYLLLGMDGPWERHNA
SALLVSLTQVIF