; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G047590 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G047590
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionHNH domain-containing protein
Genome locationchrH02:28423387..28426036
RNA-Seq ExpressionChy2G047590
SyntenyChy2G047590
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002711 - HNH endonuclease
IPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138170.1 uncharacterized protein LOC101222461 [Cucumis sativus]3.17e-13998Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSK SKKKTRPSSPLRDRTGSPTSLESR YGSHPSSLSPSASLLD+DLVTGESSLL DLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_008453210.1 PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo]1.06e-13796.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL DLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_022972967.1 uncharacterized protein LOC111471489 [Cucurbita maxima]5.83e-12689.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SK SKKKTRPSSPLRDRT   T  ESRR+GS+ S LSPS SLLD+DLVT E++LL DLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_023529236.1 uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]5.83e-12689.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SK SKKKTRPSSPLRDRT   T  ESRR+GSH S LSPS SLLD+DLVT E++LL DLK SPD SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_038880609.1 uncharacterized protein LOC120072255 [Benincasa hispida]6.61e-13293Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRR+K SKKKTR SSPLRDRTG PTSLESRRYGS+PSSLSPSASLLD+DL+TGE+SLL DLK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LUI5 HNH domain-containing protein4.3e-10798Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSK SKKKTRPSSPLRDRTGSPTSLESR YGSHPSSLSPSASLLD+DLVTGESSLL DLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A1S3BWU4 uncharacterized protein LOC1034939976.2e-10696.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL DLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A5A7US43 HNH endonuclease6.2e-10696.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL DLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1EZE0 uncharacterized protein LOC1114409501.5e-9689Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SK SKKKTRPSSPLRDRT      ESRR+GSH S LSPS SLLD+DLVT E++LL DLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD GGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1I688 uncharacterized protein LOC1114714895.3e-9789.5Show/hide
Query:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SK SKKKTRPSSPLRDRT   T  ESRR+GS+ S LSPS SLLD+DLVT E++LL DLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein1.1e-2739.86Show/hide
Query:  SPDDSVSNYN--------PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNR
        SP  S S  N        PR F    K +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKGG+S  ENCQ+LQ  VNR K  +
Subjt:  SPDDSVSNYN--------PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNR

Query:  TEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCR
          +    L   S   + + +++D++E++ YG+V R      C+
Subjt:  TEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCR

AT3G47490.1 HNH endonuclease3.8e-6363.96Show/hide
Query:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
         LGN VFRKLVGCPGCLCHDYDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

AT3G47490.2 HNH endonuclease2.1e-2955.04Show/hide
Query:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYSK
         LGN VFRKLVGCPGCLCHDYDHI+PYSK
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYSK

AT3G47490.3 HNH endonuclease1.5e-5958.06Show/hide
Query:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELS
         LGN VFRKLVGCPGCLCHDYDHI+PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELS

Query:  AYGNVHRGQDSGGCRIQ
        AYGNV R   S GCRIQ
Subjt:  AYGNVHRGQDSGGCRIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGAAGCAAAGCATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCGTTATGGCTCTCACCCATC
AAGCCTCAGCCCCTCTGCATCCCTTCTCGACCAGGACCTCGTCACCGGCGAATCCAGTCTCCTTCGAGACCTAAAATTCTCTCCCGACGACTCAGTTTCCAACTACAATC
CCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTT
CGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAAC
TGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCAGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTG
CTTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGAAGCAAAGCATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCGTTATGGCTCTCACCCATC
AAGCCTCAGCCCCTCTGCATCCCTTCTCGACCAGGACCTCGTCACCGGCGAATCCAGTCTCCTTCGAGACCTAAAATTCTCTCCCGACGACTCAGTTTCCAACTACAATC
CCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTT
CGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAAC
TGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCAGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTG
CTTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA
Protein sequenceShow/hide protein sequence
MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVF
RKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ