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Chy2G047950 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G047950
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 4
Genome locationchrH02:28631909..28632631
RNA-Seq ExpressionChy2G047950
SyntenyChy2G047950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587515.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]3.19e-0756.25Show/hide
Query:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH
        W+F    G  YASDLLL +L    PL        M+VGHII+  GF GNLYLGSVIVGICYG+ 
Subjt:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH

KAG7021495.1 Protein NUCLEAR FUSION DEFECTIVE 4 [Cucurbita argyrosperma subsp. argyrosperma]3.75e-0756.25Show/hide
Query:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH
        W+F    G  YASDLLL +L    PL        M+VGHII+  GF GNLYLGSVIVGICYG+ 
Subjt:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH

RDX75757.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Mucuna pruriens]1.30e-0759.65Show/hide
Query:  VTSKIFGIKHMGTIYSTINVAYHPIGSYILSVRI--------ASHEDNCCFWKLCFM
        +TS+IFG+KHMGTI++TI  A  P+GSYILSVRI        A  EDN CF K CFM
Subjt:  VTSKIFGIKHMGTIYSTINVAYHPIGSYILSVRI--------ASHEDNCCFWKLCFM

XP_018481036.1 PREDICTED: uncharacterized protein LOC108852043 [Raphanus sativus]2.36e-0747.5Show/hide
Query:  RIQNSPDQHLRSTLEHLEFPWSFGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH
        R  N     L S      F   FG  YASD LL K     PL       AMT+GH+I+  GF GNLY+GSVIVGICYG+ 
Subjt:  RIQNSPDQHLRSTLEHLEFPWSFGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH

XP_022933362.1 uncharacterized protein LOC111440723 [Cucurbita moschata]3.18e-0756.25Show/hide
Query:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH
        W+F    G  YASDLLL +L    PL        M+VGHII+  GF GNLYLGSVIVGICYG+ 
Subjt:  WSF----GICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGAH

TrEMBL top hitse value%identityAlignment
A0A068V316 MFS domain-containing protein4.8e-0645.21Show/hide
Query:  RSTLEHLEFPWS----FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        RSTL  L   W+    FG  YASD+ L +     PL       AMT GH+++  GF GNL++GSV+VG+CYG+
Subjt:  RSTLEHLEFPWS----FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

A0A371FBU1 Protein NUCLEAR FUSION DEFECTIVE 4 (Fragment)1.7e-0659.65Show/hide
Query:  VTSKIFGIKHMGTIYSTINVAYHPIGSYILSVRI--------ASHEDNCCFWKLCFM
        +TS+IFG+KHMGTI++TI  A  P+GSYILSVRI        A  EDN CF K CFM
Subjt:  VTSKIFGIKHMGTIYSTINVAYHPIGSYILSVRI--------ASHEDNCCFWKLCFM

A0A6J0N9Z2 uncharacterized protein LOC1088520432.8e-0657.89Show/hide
Query:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        FG  YASD LL K     PL       AMT+GH+I+  GF GNLY+GSVIVGICYG+
Subjt:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

A0A6J1EZJ6 uncharacterized protein LOC1114407232.2e-0657.14Show/hide
Query:  WSF----GICYASDLLLWKLNGLAP-------LAMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        W+F    G  YASDLLL +L    P       L M+VGHII+  GF GNLYLGSVIVGICYG+
Subjt:  WSF----GICYASDLLLWKLNGLAP-------LAMTVGHIIVVLGFRGNLYLGSVIVGICYGA

A0A6P6X9A0 protein NUCLEAR FUSION DEFECTIVE 4-like4.8e-0645.21Show/hide
Query:  RSTLEHLEFPWS----FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        RSTL  L   W+    FG  YASD+ L +     PL       AMT GH+++  GF GNL++GSV+VG+CYG+
Subjt:  RSTLEHLEFPWS----FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18940.1 Nodulin-like / Major Facilitator Superfamily protein8.7e-0850.88Show/hide
Query:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        FG  Y SD LL +     PL        MT+GH+I+  GF+GNLY GS+IVGICYG+
Subjt:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein4.6e-0952.63Show/hide
Query:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        FG  YASD LL K     PL        M++GH+I+  GF+GNLY+GSVIVG+CYG+
Subjt:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

AT2G34355.1 Major facilitator superfamily protein6.9e-0542.11Show/hide
Query:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA
        FG  Y SD  L K +   P+        M +GHIIV  G +G+LY GSV++G+ YG+
Subjt:  FGICYASDLLLWKLNGLAPL-------AMTVGHIIVVLGFRGNLYLGSVIVGICYGA

AT4G34950.1 Major facilitator superfamily protein3.4e-0446.15Show/hide
Query:  LWKLNGLAPLAMTVGHIIVVLGFRGNLYLGSVIVGICYG
        LW  N  A + M VG++++ L   G+LY+GS++VG+CYG
Subjt:  LWKLNGLAPLAMTVGHIIVVLGFRGNLYLGSVIVGICYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCAGCAGTTACATCAAAGATATTTGGGATAAAGCATATGGGCACCATTTACAGCACCATTAATGTAGCTTATCATCCCATTGGATCTTACATTTTATCTGTTAG
AATAGCCTCTCATGAAGATAATTGTTGCTTTTGGAAGCTCTGTTTTATGGAATTTTGTCTTATGAGAAATGAATATAATCGAGTCAATCGGCACAGTGAACTTCTGGCTA
TTATTTTTCACGATGACGTGTGGAATGGGATCTGGGTTAGCCATCACAAACAACATGAACCAACTCAGCCAGTCTTTAGGATACAGAACAGTCCAGATCAACACCTTCGT
TCCACTTTGGAGCATTTGGAATTTCCTTGGTCGTTTGGGATCTGCTATGCCTCTGATCTTCTCCTCTGGAAACTTAATGGCCTTGCCCCGTTAGCAATGACCGTCGGCCA
TATCATCGTAGTTTTAGGATTTCGTGGGAATTTGTATTTGGGATCGGTGATAGTGGGGATTTGTTACGGAGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCAGCAGTTACATCAAAGATATTTGGGATAAAGCATATGGGCACCATTTACAGCACCATTAATGTAGCTTATCATCCCATTGGATCTTACATTTTATCTGTTAG
AATAGCCTCTCATGAAGATAATTGTTGCTTTTGGAAGCTCTGTTTTATGGAATTTTGTCTTATGAGAAATGAATATAATCGAGTCAATCGGCACAGTGAACTTCTGGCTA
TTATTTTTCACGATGACGTGTGGAATGGGATCTGGGTTAGCCATCACAAACAACATGAACCAACTCAGCCAGTCTTTAGGATACAGAACAGTCCAGATCAACACCTTCGT
TCCACTTTGGAGCATTTGGAATTTCCTTGGTCGTTTGGGATCTGCTATGCCTCTGATCTTCTCCTCTGGAAACTTAATGGCCTTGCCCCGTTAGCAATGACCGTCGGCCA
TATCATCGTAGTTTTAGGATTTCGTGGGAATTTGTATTTGGGATCGGTGATAGTGGGGATTTGTTACGGAGCTCATTGA
Protein sequenceShow/hide protein sequence
MPAAVTSKIFGIKHMGTIYSTINVAYHPIGSYILSVRIASHEDNCCFWKLCFMEFCLMRNEYNRVNRHSELLAIIFHDDVWNGIWVSHHKQHEPTQPVFRIQNSPDQHLR
STLEHLEFPWSFGICYASDLLLWKLNGLAPLAMTVGHIIVVLGFRGNLYLGSVIVGICYGAH