; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G048120 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G048120
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRING-type domain-containing protein
Genome locationchrH02:28734426..28735768
RNA-Seq ExpressionChy2G048120
SyntenyChy2G048120
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]2.26e-24697.7Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]1.48e-24497.69Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]2.65e-25199.14Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNV+SQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDSSVERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]4.22e-24897.71Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]9.71e-23693.14Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMR+IGEENDRSVH HSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG-VSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
        NELGVGDGDS V+RGRIVQR SMNCRAWRPDDAFRPQSLP LSKQLSLPNTDRRFGCGG + W CGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG-VSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        FCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV  GSP   LARSCSMISRS
Subjt:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A0A0LP94 RING-type domain-containing protein1.0e-18099.07Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRRNELGVGDGDSSVERGRIVQRDSMNCRA
        SSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNV+SQLDSCGDRRNELGVGDGDSSVERGRIVQR SMNCRA
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRRNELGVGDGDSSVERGRIVQRDSMNCRA

Query:  WRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNE
        WRPDDAFRPQSLPTLSKQLSLP TDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNE
Subjt:  WRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNE

Query:  TNVLAGSPTLPLARSCSMISRS
        TNVLAGSPTLPLARSCSMISRS
Subjt:  TNVLAGSPTLPLARSCSMISRS

A0A1S3BVJ1 uncharacterized protein LOC1034939475.2e-19397.71Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.5e-19297.7Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X25.8e-19297.69Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDD+LSSEKINMREIGEENDRSVHHHSDY
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGDRR
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS+VERGRIVQR SMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGV WACGGV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+L GSPTLPLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070165.1e-17288.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDD+LSS+KINMREIG +N  SVHH SD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR
        S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQCSESSPRG+ VSQLDSCGD R
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRR

Query:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS +E GRI QR  M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        CHKRILEEDGRCPGCRKPY+ DPAD+ETNV  GSPTLPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 41.3e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 43.7e-1050Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c1.1e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 41.3e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein3.5e-1627.66Show/hide
Query:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGNDSG
        KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++    K  D  + +I+  +  E+++  +   S ++ SP        +S+L   DS 
Subjt:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRRNELGVGDGDSSVERGRIVQRDS
                     S    C S  +TEEEEE    DD  D+W+   DAL + +  +++ S          + D   D    +     +++      + R+ 
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRRNELGVGDGDSSVERGRIVQRDS

Query:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR-
                            S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y + 
Subjt:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR-

Query:  DPADNETNV-LAGSPTLPLARSCSMISRS
             E      G  T+PL+ S   + R+
Subjt:  DPADNETNV-LAGSPTLPLARSCSMISRS

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein2.6e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein1.6e-6445.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIG------EENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + SEK + R++       +E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIG------EENDRSV

Query:  HHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  + +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDRRNELGVGDGDSSVERGRI--VQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  +   +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDRRNELGVGDGDSSVERGRI--VQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V  G  T+ LARS SM  RS
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein4.5e-6445.68Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIG------EENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + SEK + R++       +E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIG------EENDRSV

Query:  HHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  + +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDYSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDRRNELGVGDGDSSVERGRI--VQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  +   +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDRRNELGVGDGDSSVERGRI--VQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V  G  T+ LARS SM  R
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein3.7e-6646.09Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY
        M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  EE +     V +++K    SS+K+  RE       ++ HH  +
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDY

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV
         +SPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  ++ DD C+DDWEA+ADALAA ++            +Q S      NV 
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV

Query:  SQLDSCGDRRNELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLP
            S  D  + +GV   D   E  R+  R   + RAWR DD  RPQ LP L+KQLS P  D+RF            + +P+SCPIC+EDLDLTDS+FLP
Subjt:  SQLDSCGDRRNELGVGDGDSSVERGRIVQRDSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLP

Query:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR
        C CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++  G  T+ LARS SM  +
Subjt:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCACCTAACGCACGGGATTTGCCCCTGCCAAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAATCCAA
GCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAGGAAGACAATCGGCTCGATTCAGTGGTTATTAAAACGAGGAAAGATG
ATGACCTTTCCTCTGAAAAAATAAATATGAGGGAAATAGGAGAAGAGAATGACAGATCGGTCCACCACCATAGCGATTATTCGGACTCACCGTCTAATAGCCCCCCTAGT
CTTGGCAGTAGTATATTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGTGGCTGTCGCTCGGGGAGTATAAC
GGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCAGAGTCTT
CCCCCAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGAAGAAACGAGTTGGGCGTAGGAGATGGTGACTCGAGTGTTGAGCGTGGGAGAATAGTGCAGAGG
GATTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGACCGGCGTTTTGGATG
TGGAGGGGTCTCTTGGGCCTGTGGTGGTGTTATTCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTG
GATTTCGACTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGAAAGCCATATGATCGTGATCCTGCTGACAATGAAACAAACGTA
CTTGCTGGCAGCCCAACGTTACCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCACCTAACGCACGGGATTTGCCCCTGCCAAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAATCCAA
GCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAGGAAGACAATCGGCTCGATTCAGTGGTTATTAAAACGAGGAAAGATG
ATGACCTTTCCTCTGAAAAAATAAATATGAGGGAAATAGGAGAAGAGAATGACAGATCGGTCCACCACCATAGCGATTATTCGGACTCACCGTCTAATAGCCCCCCTAGT
CTTGGCAGTAGTATATTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGTGGCTGTCGCTCGGGGAGTATAAC
GGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCAGAGTCTT
CCCCCAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGAAGAAACGAGTTGGGCGTAGGAGATGGTGACTCGAGTGTTGAGCGTGGGAGAATAGTGCAGAGG
GATTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGACCGGCGTTTTGGATG
TGGAGGGGTCTCTTGGGCCTGTGGTGGTGTTATTCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTG
GATTTCGACTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGAAAGCCATATGATCGTGATCCTGCTGACAATGAAACAAACGTA
CTTGCTGGCAGCCCAACGTTACCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPS
LGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDRRNELGVGDGDSSVERGRIVQR
DSMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNV
LAGSPTLPLARSCSMISRS