; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G048350 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G048350
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSpermidine synthase
Genome locationchrH02:28901708..28905741
RNA-Seq ExpressionChy2G048350
SyntenyChy2G048350
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0004766 - spermidine synthase activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030373 - Polyamine biosynthesis domain, conserved site
IPR030374 - Polyamine biosynthesis domain
IPR035246 - Spermidine synthase, tetramerisation domain
IPR037163 - Spermidine synthase, tetramerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057879.1 spermidine synthase 2-like isoform X1 [Cucumis melo var. makuwa]5.65e-19090.37Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NNN  GCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+ML   +SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  P
        P
Subjt:  P

XP_008453103.1 PREDICTED: spermidine synthase 2-like isoform X1 [Cucumis melo]4.66e-19491.36Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NNN  GCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  P
        P
Subjt:  P

XP_008453104.1 PREDICTED: spermidine synthase-like isoform X2 [Cucumis melo]8.35e-19691.39Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NNN  GCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PR
        PR
Subjt:  PR

XP_008453105.1 PREDICTED: spermidine synthase-like isoform X3 [Cucumis melo]7.20e-19691.39Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NNN  GCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINNN--GCSDHVQVSEVM-----EDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PR
        PR
Subjt:  PR

XP_011657853.1 spermidine synthase 2 isoform X1 [Cucumis sativus]3.54e-21196.96Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAY
        MAMDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMED+K++EEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG SAY
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAY

Query:  QSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYR
        QSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYR
Subjt:  QSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYR

Query:  VNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
        VNLHIIDG+ FLSSVPP SYDAIIVDAFDPIKPDDEV+RSKLFEKVAKALKEGGVLCIQAESLWFH+LDIQILISKCKQVFKGSVQYAWTIVPAYP
Subjt:  VNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP

TrEMBL top hitse value%identityAlignment
A0A0A0LP68 PABS domain-containing protein2.2e-16494.39Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQS
        MDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMED+K++EEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG SAYQS
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQS

Query:  MLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVN
        MLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVN
Subjt:  MLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVN

Query:  LHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHR
        LHIIDG+ FLSSVPP SYDAIIVDAFDPIKPDDEV+RSKLFEKVAKALKEGGVLCIQAESLWFH+LDIQILISKCKQVFKGSVQYAWTIVPAYP  +   
Subjt:  LHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHR

Query:  FVC
         +C
Subjt:  FVC

A0A1S3BVD5 spermidine synthase-like isoform X26.5e-15391.39Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NN  NGCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PR
        PR
Subjt:  PR

A0A1S3BVF4 spermidine synthase 2-like isoform X11.9e-15289.03Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NN  NGCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PRYIQHRFVC
        P  +    +C
Subjt:  PRYIQHRFVC

A0A1S3BWJ9 spermidine synthase-like isoform X36.5e-15391.39Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NN  NGCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+MLVFQ+SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PR
        PR
Subjt:  PR

A0A5A7UWC7 Spermidine synthase 2-like isoform X14.4e-14988.06Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ
        MDANGVLSFSDDLVFK+KKDEVL NN  NGCS H+QV E       ED++EEEEEEEDNSIIINGDDPL++PTIPGWF EHCPQWPGQAHFLKVDKVLFQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVLINN--NGCSDHVQVSEV-----MEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQ

Query:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG
        GKSAYQ+ML   +SAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVG
Subjt:  GKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVG

Query:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY
        YKDYRVNLHIIDGSAFLSSVPP SYDAIIVDAFDPIKPDDEVVRSKLFE VAKALKEGGVLCIQAESLWF +LDIQILISKCKQVFKGSVQYAWTIVPAY
Subjt:  YKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAY

Query:  PRYIQHRFVC
        P  +    +C
Subjt:  PRYIQHRFVC

SwissProt top hitse value%identityAlignment
O48658 Spermidine synthase 11.2e-9264.83Show/hide
Query:  DDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGIL
        + P     +PGWFSE  P WPG+AH LKV+K+LFQGKS YQ+++VFQ+S YGKV VLDG +QLTE+DECAYQEMITHLPLCSIPNPKKVLVIGGGDGG+L
Subjt:  DDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGIL

Query:  REISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQA
        RE+SRHSS+E IDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VP  +YDA+IVD+ DPI P  E+     FE +A+AL+ GGV+  QA
Subjt:  REISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQA

Query:  ESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
        ES+W H   I+ +++ C+Q+FKGSV YAWT VP YP
Subjt:  ESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP

O48659 Spermidine synthase 27.3e-9365.4Show/hide
Query:  IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSS
        +PGWFSE  P WPG+AH LKV+K+LFQGKS YQ+++VFQ+S YGKV VLDG +QLTE+DECAYQEMITHLPLCSIPNPKKVLVIGGGDGG+LRE+SRHSS
Subjt:  IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSS

Query:  IEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTL
        +E IDICEID M+IDV K++FP +A+GY+D RV LH+ DG AFL +VP  +YDA+IVD+ DPI P  E+     FE VA+AL  GGV+C QAES+W H  
Subjt:  IEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTL

Query:  DIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC
         I+ ++S C+Q+FKGSV YAWT VP YP  +    +C
Subjt:  DIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC

Q96556 Spermidine synthase 12.8e-9262.35Show/hide
Query:  NGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGG
        N + P     +PGWFSE  P WPG+AH LKV+K+LFQGKS YQ+++VFQ+S YGKV +LDG +QLTE+DECAYQEMITHLPLCSIPNPKKVLVIGGGDGG
Subjt:  NGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGG

Query:  ILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCI
        +LRE+SRHSS+E IDICEID M+IDV K++FP +A+GY+D RV LH+ DG AFL  V   +YDA+IVD+ DPI P  E+     FE VA+AL+ GGV+C 
Subjt:  ILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCI

Query:  QAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC
        QAES+W H   I+ +++ C+Q+FKGSV YAWT VP YP  +    +C
Subjt:  QAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC

Q96557 Spermidine synthase 28.1e-9262.3Show/hide
Query:  DNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVI
        +N    + + P     +PGWFSE  P WPG+AH LKV+K+LFQGKS YQ ++VFQ++ YGKV VLDG +QLTE+DECAYQEMITHLPLCSIPNPKKVLVI
Subjt:  DNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVI

Query:  GGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKE
        GGGDGG+LRE+SRHSS+E IDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VP  +YDA+IVD+ DPI P  E+     FE +A+AL+ 
Subjt:  GGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKE

Query:  GGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
        GGV+  QAES+W H   I+ +++ C+++FKGSV YAWT VP YP
Subjt:  GGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP

Q9ZS45 Spermidine synthase9.5e-9361.89Show/hide
Query:  VSEVMEDQKEEEEEEEDNSIIING-----DDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAY
        V    E++ E E E  +NS   NG       P     +PGWFSE  P WPG+AH LKV+K+LFQGKS YQ++LVFQ+S YGKV VLDG +QLTE+DECAY
Subjt:  VSEVMEDQKEEEEEEEDNSIIING-----DDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAY

Query:  QEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPI
        QEMITHLPLCSIPNPKKVLVIGGGDGG+LRE+SRHSS+E IDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VP  +YDA+IVD+ DPI
Subjt:  QEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPI

Query:  KPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
         P  E+     FE +AKAL+ GGV+  QAES+W H   I+ +++ C+Q+FKGSV YAWT VP YP
Subjt:  KPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 11.4e-9159.41Show/hide
Query:  DQKEEEEEEEDNSIII----NGD---DPLNYPT-IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEM
        D K   EE+++         NGD   +P  + T IPGWFSE  P WPG+AH LKV+KVLFQGKS YQ ++VFQ++ YGKV VLDG +QLTE+DECAYQEM
Subjt:  DQKEEEEEEEDNSIII----NGD---DPLNYPT-IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEM

Query:  ITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPD
        ITHLPLCSIPNPKKVLVIGGGDGG+LRE++RH+SIE ID+CEID M++DV K++FP++A+GY+D RVNL I DG AFL +    SYDA+IVD+ DPI P 
Subjt:  ITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPD

Query:  DEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC
         E+     F+ VA+AL+ GGV+C QAESLW H   I+ ++S C+++FKGSV YAWT VP YP  +    +C
Subjt:  DEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC

AT1G23820.2 spermidine synthase 11.3e-9260.67Show/hide
Query:  DQKEEEEEEEDNSIII----NGD---DPLNYPT-IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEM
        D K   EE+++         NGD   +P  + T IPGWFSE  P WPG+AH LKV+KVLFQGKS YQ ++VFQ++ YGKV VLDG +QLTE+DECAYQEM
Subjt:  DQKEEEEEEEDNSIII----NGD---DPLNYPT-IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEM

Query:  ITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPD
        ITHLPLCSIPNPKKVLVIGGGDGG+LRE++RH+SIE ID+CEID M++DV K++FP++A+GY+D RVNL I DG AFL +    SYDA+IVD+ DPI P 
Subjt:  ITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPD

Query:  DEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQH
         E+     F+ VA+AL+ GGV+C QAESLW H   I+ ++S C+++FKGSV YAWT VP YPR+  H
Subjt:  DEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQH

AT1G70310.1 spermidine synthase 29.2e-9159.63Show/hide
Query:  KEEEEEEEDNS----IIINGDDPLNYPT-----IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMI
        K   E EEDN+       NG   +  P+     IPGWFSE  P WPG+AH LKV+K+LFQGKS YQ ++VFQ++ YGKV VLDG +QLTE+DECAYQEMI
Subjt:  KEEEEEEEDNS----IIINGDDPLNYPT-----IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMI

Query:  THLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDD
        THLPLCSI NPKKVLVIGGGDGG+LRE++RHSS+E IDICEID M++DV K+YFP +AVGY+D RVNL I DG AFL +    +YDA+IVD+ DPI P  
Subjt:  THLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDD

Query:  EVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC
        E+     FE V +AL+ GGV+C QAESLW H   I+ ++S C+ +FKGSV YAWT VP YP  +    +C
Subjt:  EVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVC

AT5G53120.1 spermidine synthase 38.6e-8160.49Show/hide
Query:  IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIG
        + GWFSE               + P WPG+AH LKV+KVLF+ KS +Q +LVF+++ YGKV VLDG +QLTEKDECAYQEMI HLPLCSI +PK VLV+G
Subjt:  IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIG

Query:  GGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEG
        GGDGG+LREISRHSS+E IDICEID M+IDV KK+FPE+AVG+ D RV LHI D + FL   P   YDAIIVD+ DP+ P   +V    FE +A+ALK G
Subjt:  GGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEG

Query:  GVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
        GVLC  AES+W HT  I+ +IS C+Q FK SV YAW+ VP YP
Subjt:  GVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP

AT5G53120.2 spermidine synthase 38.6e-8160.49Show/hide
Query:  IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIG
        + GWFSE               + P WPG+AH LKV+KVLF+ KS +Q +LVF+++ YGKV VLDG +QLTEKDECAYQEMI HLPLCSI +PK VLV+G
Subjt:  IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSAYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIG

Query:  GGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEG
        GGDGG+LREISRHSS+E IDICEID M+IDV KK+FPE+AVG+ D RV LHI D + FL   P   YDAIIVD+ DP+ P   +V    FE +A+ALK G
Subjt:  GGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESYDAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEG

Query:  GVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP
        GVLC  AES+W HT  I+ +IS C+Q FK SV YAW+ VP YP
Subjt:  GVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGATGCCAATGGGGTTCTTTCTTTTTCAGATGATCTGGTGTTTAAGCAGAAGAAAGATGAGGTTTTGATCAACAATAATGGCTGCTCTGATCATGTGCAAGT
TTCTGAAGTTATGGAAGATCAAAAAGAAGAAGAAGAAGAAGAAGAAGATAACTCCATTATAATCAATGGTGATGATCCTCTCAATTATCCAACCATTCCTGGTTGGTTTT
CTGAGCACTGCCCACAATGGCCAGGTCAAGCACACTTCTTAAAAGTGGATAAAGTTTTGTTTCAAGGAAAGTCTGCCTATCAATCCATGTTGGTTTTTCAGACATCAGCA
TATGGAAAGGTATTTGTGTTGGATGGAGCACTCCAACTCACTGAGAAAGATGAATGTGCTTACCAAGAAATGATTACCCACCTTCCTCTTTGCTCTATCCCAAACCCTAA
AAAGGTATTGGTGATTGGGGGAGGAGATGGTGGCATTCTAAGAGAGATTTCTAGACATTCTTCCATTGAACATATTGACATTTGTGAAATAGACACCATGCTCATTGATG
TATACAAGAAGTACTTTCCCGAAATTGCAGTTGGATACAAAGATTATCGAGTGAATCTTCATATAATTGATGGAAGTGCTTTTCTGAGTTCTGTTCCACCAGAAAGCTAC
GATGCAATCATTGTCGACGCTTTCGATCCAATAAAGCCAGATGATGAAGTAGTGAGAAGTAAGTTGTTTGAGAAGGTGGCAAAAGCACTTAAAGAAGGAGGAGTACTTTG
TATTCAAGCAGAAAGTCTTTGGTTTCATACTCTTGACATTCAAATTTTGATCTCCAAATGCAAACAAGTTTTCAAAGGCTCGGTTCAATATGCTTGGACCATTGTTCCTG
CTTACCCTAGGTACATTCAGCATCGTTTTGTTTGCCATCATTTGCAAAGAAAGCGAAAGGATGAAGAAGCAATAACTAAAGGAAAAGAAGGGATAAAATTGATAGACATC
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGATGCCAATGGGGTTCTTTCTTTTTCAGATGATCTGGTGTTTAAGCAGAAGAAAGATGAGGTTTTGATCAACAATAATGGCTGCTCTGATCATGTGCAAGT
TTCTGAAGTTATGGAAGATCAAAAAGAAGAAGAAGAAGAAGAAGAAGATAACTCCATTATAATCAATGGTGATGATCCTCTCAATTATCCAACCATTCCTGGTTGGTTTT
CTGAGCACTGCCCACAATGGCCAGGTCAAGCACACTTCTTAAAAGTGGATAAAGTTTTGTTTCAAGGAAAGTCTGCCTATCAATCCATGTTGGTTTTTCAGACATCAGCA
TATGGAAAGGTATTTGTGTTGGATGGAGCACTCCAACTCACTGAGAAAGATGAATGTGCTTACCAAGAAATGATTACCCACCTTCCTCTTTGCTCTATCCCAAACCCTAA
AAAGGTATTGGTGATTGGGGGAGGAGATGGTGGCATTCTAAGAGAGATTTCTAGACATTCTTCCATTGAACATATTGACATTTGTGAAATAGACACCATGCTCATTGATG
TATACAAGAAGTACTTTCCCGAAATTGCAGTTGGATACAAAGATTATCGAGTGAATCTTCATATAATTGATGGAAGTGCTTTTCTGAGTTCTGTTCCACCAGAAAGCTAC
GATGCAATCATTGTCGACGCTTTCGATCCAATAAAGCCAGATGATGAAGTAGTGAGAAGTAAGTTGTTTGAGAAGGTGGCAAAAGCACTTAAAGAAGGAGGAGTACTTTG
TATTCAAGCAGAAAGTCTTTGGTTTCATACTCTTGACATTCAAATTTTGATCTCCAAATGCAAACAAGTTTTCAAAGGCTCGGTTCAATATGCTTGGACCATTGTTCCTG
CTTACCCTAGGTACATTCAGCATCGTTTTGTTTGCCATCATTTGCAAAGAAAGCGAAAGGATGAAGAAGCAATAACTAAAGGAAAAGAAGGGATAAAATTGATAGACATC
TAG
Protein sequenceShow/hide protein sequence
MAMDANGVLSFSDDLVFKQKKDEVLINNNGCSDHVQVSEVMEDQKEEEEEEEDNSIIINGDDPLNYPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSAYQSMLVFQTSA
YGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGILREISRHSSIEHIDICEIDTMLIDVYKKYFPEIAVGYKDYRVNLHIIDGSAFLSSVPPESY
DAIIVDAFDPIKPDDEVVRSKLFEKVAKALKEGGVLCIQAESLWFHTLDIQILISKCKQVFKGSVQYAWTIVPAYPRYIQHRFVCHHLQRKRKDEEAITKGKEGIKLIDI