CuGenDBv2

Gene ID	Chy2G048700
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Golgin subfamily A member 6-like protein 2
Genome location	chrH02:29246576..29247481
RNA-Seq Expression	Chy2G048700
Synteny	Chy2G048700
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0057829.1 golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa]

6.49e-141

96.79

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVR VI EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALK+QLQAKEETIK+LKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIET HKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

XP_004138095.1 uncharacterized protein LOC101204691 [Cucumis sativus]

6.05e-146

98.62

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGLHWG TERTEALK+QLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIETFHKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

XP_008464528.1 PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo]

3.91e-142

97.25

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVI EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALK+QLQAKEETIK+LKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIET HKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

XP_023530768.1 uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]

2.17e-123

86.24

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSK GS I  DDV GLKEKIRLLREEVRGV+ EMDKE KAHEKDMV+FAFKEA WKTEKK+L+EEVKMLRKKVKE  TEIEEGNFGEK ATEWE+E
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
         TPNTIFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGA ERTEAL+++L AKEETIKALKEQV SMEQ+KYKR+ EIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKE+QIETFH CVCK
Subjt:  MTSKKEQQIETFHKCVCK

XP_038879675.1 uncharacterized protein LOC120071454 [Benincasa hispida]

1.20e-136

93.12

Show/hide

Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEI+ D+VKGLKEKIRLLREEVRGV+  MDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKES TEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGLHWGA+ERTEALK++L+AKEETIKALKE+VVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIE FHKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS07 Uncharacterized protein

4.7e-115

98.62

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGLHWG TERTEALK+QLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIETFHKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

A0A1S3CLU2 uncharacterized protein LOC103502383

3.7e-112

97.25

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVI EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALK+QLQAKEETIK+LKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIET HKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

A0A5A7UW79 Golgin subfamily A member 6-like protein 2

3.1e-111

96.79

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVR VI EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALK+QLQAKEETIK+LKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIET HKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

A0A5D3BGY2 Golgin subfamily A member 6-like protein 2

3.7e-112

97.25

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVI EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
        GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALK+QLQAKEETIK+LKEQVVSMEQDKYKRNREIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKEQQIET HKCVCK
Subjt:  MTSKKEQQIETFHKCVCK

A0A6J1EVL0 uncharacterized protein LOC111438196

2.0e-97

85.78

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME
        MGVCSSK GS I  DDV GLKEKIRLLREEVRGV+ EMD+E KAHEKDMV+FAFKEA WKTEKK+L+EEVKMLRKKVKE  TEIEEGNFGEK ATEWE+E
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEME

Query:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI
         TPNTIFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGA ERTEAL+++L AKEETIKALKEQV SMEQ+KYKR+ EIDILRQSLRI
Subjt:  GTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRI

Query:  MTSKKEQQIETFHKCVCK
        MTSKKE QIETFH CVCK
Subjt:  MTSKKEQQIETFHKCVCK

SwissProt top hits

e value

%identity

Alignment

Q8IIG7 Uncharacterized protein PF11_0207

3.8e-05

27.09

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Query:  DDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQE-
        +++K +KE+I+ ++EE++  I E  KE K   K+ +    KE   K E K +KEE+K +++++KE   EI+E     K   + E++     + E+I++E 
Subjt:  DDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQE-

Query:  RARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLR--IMTSKKEQQIET
        +    E  E+ K++   IK E+ + I+             E  E +K   +  +E IK +KE++   E+ K +   EI  +++ L+  I +   +++  T
Subjt:  RARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLR--IMTSKKEQQIET

Query:  FHK
         HK
Subjt:  FHK

Arabidopsis top hits

e value

%identity

Alignment

AT3G23930.1 unknown protein

3.1e-26

39.38

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Query:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEA--GWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWE
        MG C+SK         V+ +KE  +      R +I E D+  K     ++    KEA   W+ E+K+L+EEV+ LRKK++E   E +     E+   +W 
Subjt:  MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEA--GWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWE

Query:  MEGTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDG-------LHWGATERTEA-----LKSQLQAKEETIKALKEQVVSMEQDKYK
               + E++  ERA RDEAVEKWKQLY AIK ELD LI  T +  G       L     E TEA     L+ +++ KEET++ L+EQ+V M++ KY+
Subjt:  MEGTPNTIFEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDG-------LHWGATERTEA-----LKSQLQAKEETIKALKEQVVSMEQDKYK

Query:  RNREIDILRQSLRIMTSKKEQQIETF
        + REID+LRQSLRI+ SKK+++  +F
Subjt:  RNREIDILRQSLRIMTSKKEQQIETF

AT4G13540.1 unknown protein

9.2e-23

39.7

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Query:  GSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFK--EAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTI
        G     D+    K +I++   E R      +   +  EK+ V+ A K  E  W+ E+KRL+EEVK LR+K++E     EEG   +    EWE       +
Subjt:  GSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFK--EAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTI

Query:  FEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATER----TEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIM
         EQ+  ERA R+EAVE+WKQLY AIK ELDDLI  T+ G+ L     E      + L+ +++A+ ETI+ LK ++  ME+ +  + REID+LRQSLRI+
Subjt:  FEQIQQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATER----TEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTTATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGA
AATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAAGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGA
GGAAGAAGGTAAAAGAGAGTTTTACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATA
CAACAGGAAAGAGCACGAAGAGATGAAGCCGTTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAGATGG
ATTACATTGGGGAGCGACTGAGAGGACGGAAGCACTAAAATCACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGACA
AATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQI
QQERARRDEAVEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKSQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK

Chy2G048700 (gene) of Cucumber (hystrix) v1 genome