CuGenDBv2

Gene ID	Chy2G049660
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Rubredoxin-like domain-containing protein
Genome location	chrH02:29835547..29837053
RNA-Seq Expression	Chy2G049660
Synteny	Chy2G049660
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

1.01e-112

97.58

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

1.67e-111

96.36

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

6.94e-93

84.94

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPLR+IPS RKQ   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAA-LGIVALIGKF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA +GIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAA-LGIVALIGKF

XP_022987160.1 uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]

3.11e-93

83.64

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPL +IPS RKQ   VAAA PKFS+RVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

9.32e-95

84.85

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR SM   SASNR SLKSSFISPLR+IPS RKQ   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GI+AL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF5 Rubredoxin-like domain-containing protein

2.7e-85

97.58

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

2.3e-84

96.36

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

A0A5A7UPF0 Rubredoxin family protein

2.3e-84

96.36

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X1

1.1e-70

84.94

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPLR+IPS RKQ   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAALGIVALIGKF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPI AAA+GIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAALGIVALIGKF

E5GBM0 Electron transporter

2.3e-84

96.36

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Query:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVAL+G +
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

3.4e-05

39.29

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Query:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

3.1e-06

51.16

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Query:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

5.9e-05

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Query:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE
        ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

1.3e-04

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Query:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

6.5e-04

39.22

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Query:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ
        Y+C  CGYIY           N  T F+ +PD + CP+CG  K +F P E+
Subjt:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

1.2e-08

41.94

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Query:  ASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSK
        A P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+    K
Subjt:  ASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSK

AT5G51010.1 Rubredoxin-like superfamily protein

5.8e-40

55.56

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Query:  LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPV
        ++  LPP   Y          R+S+ L   +  L  +SSF+ P   +  L  + S+  +++P+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPV
Subjt:  LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPV

Query:  CGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVAL
        C APKRRFR Y   VSKN N+ DVRKARKA++Q+DEA+GK LPI  A+G++AL
Subjt:  CGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVAL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCGTTTCAGCTTCTTCTCTCAGTTTCCACCTACCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTC
TGCGTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCA
TGCGCGTGGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGT
GCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGG
GAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTATAGGAAAATTCAAGCTGACCTACTGTTGGAAAGCTGGTTGTGTAACTGCTGCAGTTGCAGAACCAG
GAAATGTGCTTTTAAGGATGGTCAGCCAGGCATCTGAGAAGTGA

mRNA sequence

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Protein sequence

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MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCG
APKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALIGKFKLTYCWKAGCVTAAVAEPGNVLLRMVSQASEK

Chy2G049660 (gene) of Cucumber (hystrix) v1 genome