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Chy3G053340 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G053340
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionselenoprotein K
Genome locationchrH03:4805271..4807370
RNA-Seq ExpressionChy3G053340
SyntenyChy3G053340
Gene Ontology termsGO:0006816 - calcium ion transport (biological process)
GO:0032469 - endoplasmic reticulum calcium ion homeostasis (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024491 - Selenoprotein SelK/SelG


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646613.1 hypothetical protein Csa_005613 [Cucumis sativus]1.38e-6198.96Show/hide
Query:  VGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        VGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  VGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

KAG6578980.1 Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia]4.65e-6395.28Show/hide
Query:  MILISILGLVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGG-RPRGPPRGLDNVRGIDHSSLPA
        MIL+SIL LVGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGG RPRGPPRGLDNVRGIDHSSLPA
Subjt:  MILISILGLVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGG-RPRGPPRGLDNVRGIDHSSLPA

Query:  CGSCCG
        CGSCCG
Subjt:  CGSCCG

XP_004140863.1 selenoprotein K isoform X1 [Cucumis sativus]1.20e-6198.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

XP_022964558.1 selenoprotein K-like [Cucurbita moschata]1.70e-6197.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

XP_031743925.1 selenoprotein K isoform X2 [Cucumis sativus]4.18e-6296.97Show/hide
Query:  LGLVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        L L GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  LGLVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

TrEMBL top hitse value%identityAlignment
A0A0A0KDW6 Uncharacterized protein4.6e-4798.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A1S3BE45 selenoprotein K7.9e-4796.84Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1HI52 selenoprotein K-like6.0e-4797.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1JQF6 selenoprotein K6.0e-4797.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1JVZ4 selenoprotein K-like3.0e-4696.84Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG GPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G08230.1 glycine-rich protein4.0e-2761.68Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGDGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLP
        GVVK++R  WRL+TI DFF +I+N+I VFF T+FSMEKS+AYRKGS   KKW      G G GG   G  GGR  GPPR GLDNVRG+      DH+SLP
Subjt:  GVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGDGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLP

Query:  ACGSCCG
        ACGSCCG
Subjt:  ACGSCCG

AT4G08230.2 glycine-rich protein3.3e-1361.11Show/hide
Query:  MEKSEAYRKGSGSGKKW-----DGDGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG
        MEKS+AYRKGS   KKW      G G GG   G  GGR  GPPR GLDNVRG+      DH+SLPACGSCCG
Subjt:  MEKSEAYRKGSGSGKKW-----DGDGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCATGATTTTGATTTCCATTTTGGGCCTAGTAGGTGTTGTGAAGTCCCAGAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATC
GTAAACGTTATCGGCGTGTTTTTTACCACCTTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCAGGGAAGAAATGGGATGGTGATGGCCCT
GGAGGTCCTGGGTCGGGGCCCTATGGTGGTCGTCCCCGCGGTCCACCTCGTGGCCTCGACAATGTTCGAGGGATTGATCACAGCTCGTTACCTGCCTGTGGCTCG
TGCTGTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCATGATTTTGATTTCCATTTTGGGCCTAGTAGGTGTTGTGAAGTCCCAGAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATC
GTAAACGTTATCGGCGTGTTTTTTACCACCTTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCAGGGAAGAAATGGGATGGTGATGGCCCT
GGAGGTCCTGGGTCGGGGCCCTATGGTGGTCGTCCCCGCGGTCCACCTCGTGGCCTCGACAATGTTCGAGGGATTGATCACAGCTCGTTACCTGCCTGTGGCTCG
TGCTGTGGATAA
Protein sequenceShow/hide protein sequence
MHFMILISILGLVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGDGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGS
CCG