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Chy3G054980 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G054980
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMuDRA-like transposase
Genome locationchrH03:7151521..7152399
RNA-Seq ExpressionChy3G054980
SyntenyChy3G054980
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048219.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.91e-1730.98Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------------------------FD--VQVHHE-ELPLKECVVESD
        M  +S K D P PNL CSH+S +   L P  RN+CPLELG+D  G                                FD   Q+H+E  +  +  +++SD
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------------------------FD--VQVHHE-ELPLKECVVESD

Query:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT
        ++E P  I KKK K VEKL+  T+F                 L  + +K                       ++ S   +   ++    K F I      
Subjt:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT

Query:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF
        L  +R+  RA+E    M RG  +E YALLAR  EALKI N GT  + +VDLD HF
Subjt:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF

KAA0051701.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.98e-1331.82Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR
        MA ES K D  N NLKCSH+S +V  LIP   NMCPL++GD+ +G               +    +EEF    G           E  I F V       
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR

Query:  N*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEA
                                                   M M        K F I       +      RA++A L MVR S RE Y LLAR+GEA
Subjt:  N*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEA

Query:  LKITNSGT*YNLKVDLDGHF
        LKI N  T YNL+V+ DGHF
Subjt:  LKITNSGT*YNLKVDLDGHF

KAE8652907.1 hypothetical protein Csa_022657 [Cucumis sativus]3.03e-4843.98Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR
        MARESNKPD+PNPNLKCSHI TKVCELI FT NMCPLELGD+ NGFDVQV HEE+PLKE  VESDDEE PP+IGK+  K V+KLLERTIFFRVHR+   +
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR

Query:  N*KILIC--------LRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVV-------------IGPKK*FRIS*RSLTLICRRIGLRAREAT
        N  +L C        LR+  +K     K S   +T +  +V    ++  +  K  V+                PK+  +   +   +             
Subjt:  N*KILIC--------LRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVV-------------IGPKK*FRIS*RSLTLICRRIGLRAREAT

Query:  LLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF
        +    G  +     +      LKI NS T YN +VD +GHF
Subjt:  LLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF

TYK08037.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.05e-1230.04Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------------------------FD--VQVHHE-ELPLKECVVESD
        M  +S K D P PNL CSH+S +   L P  RN+CPLELG+D  G                                FD   Q+H+E  +  +  +++SD
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------------------------FD--VQVHHE-ELPLKECVVESD

Query:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT
        ++E P  I KKK K VEKL+  T+F                 L  + +K                       ++ S   +   ++    K F I      
Subjt:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT

Query:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT
        L  +R+  RA+E    M RG  +E YALLAR  EALKI N GT
Subjt:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT

TYK16337.1 hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa]3.97e-1065.22Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF
        MA ES KP SPNPN K SH+S ++ EL P T NMCPLEL D+G GF
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF

TrEMBL top hitse value%identityAlignment
A0A0A0K393 Uncharacterized protein1.1e-1040.34Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNM--------------------------------CPLELGDDGNGFDV----------QVHHEELPLK
        MA E+ KP+SPNPNLKCSH+ST+V EL   T N                                   +ELG D    D+          QVHHEELPL+
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNM--------------------------------CPLELGDDGNGFDV----------QVHHEELPLK

Query:  ECVVESDDEEFPPTIGKKK
        E  VESDDE+  P++GKKK
Subjt:  ECVVESDDEEFPPTIGKKK

A0A0A0K9J4 Uncharacterized protein2.3e-3772.88Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR
        MARESNKPD+PNPNLKCSHI TKVCELI FT NMCPLELGD+ NGFDVQV HEE+PLKE  VESDDEE PP+IGK+  K V+KLLERTIFFRVHR+   +
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR

Query:  N*KILICLRS-LSMKGRT
        N  +L C  S  S K RT
Subjt:  N*KILICLRS-LSMKGRT

A0A5A7U446 MuDRA-like transposase1.6e-1430.2Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF----------------------------------DVQVHHE-ELPLKECVVESD
        M  +S K D P PNL CSH+S +   L P  RN+CPLELG+D  G                                   + Q+H+E  +  +  +++SD
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF----------------------------------DVQVHHE-ELPLKECVVESD

Query:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT
        ++E P  I KKK K VEKL+  T+F                 L  + +K                       ++ S   +   ++    K F I      
Subjt:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT

Query:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF
        L  +R+  RA+E    M RG  +E YALLAR  EALKI N GT  + +VDLD HF
Subjt:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF

A0A5D3C7U6 MuDRA-like transposase8.3e-1129.22Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF----------------------------------DVQVHHE-ELPLKECVVESD
        M  +S K D P PNL CSH+S +   L P  RN+CPLELG+D  G                                   + Q+H+E  +  +  +++SD
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF----------------------------------DVQVHHE-ELPLKECVVESD

Query:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT
        ++E P  I KKK K VEKL+  T+F                 L  + +K                       ++ S   +   ++    K F I      
Subjt:  DEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLT

Query:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT
        L  +R+  RA+E    M RG  +E YALLAR  EALKI N GT
Subjt:  LICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT

A0A5D3E646 MuDRA-like transposase3.1e-1031.82Show/hide
Query:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR
        MA ES K D  N NLKCSH+S +V  LIP   NMCPL++GD+ +G               +    +EEF    G           E  I F V       
Subjt:  MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLR

Query:  N*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEA
                                                   M M        K F I       +      RA++A L MVR S RE Y LLAR+GEA
Subjt:  N*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEA

Query:  LKITNSGT*YNLKVDLDGHF
        LKI N  T YNL+V+ DGHF
Subjt:  LKITNSGT*YNLKVDLDGHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGGAAAGCAACAAACCCGATTCCCCTAATCCCAACCTTAAATGCTCACATATATCGACTAAGGTCTGCGAGCTAATTCCTTTCACTAGGAATATGTGT
CCCTTAGAGTTGGGAGACGATGGAAATGGCTTCGATGTCCAAGTACATCATGAAGAATTACCACTTAAGGAATGTGTAGTGGAAAGTGACGACGAAGAATTTCCT
CCAACAATTGGCAAGAAAAAGTGAAAGTGTGTTGAAAAGTTGTTGGAACGCACCATTTTTTTTCGTGTGCATAGAAACTAAGGGCTACGAAACTGAAAGATTCTG
ATCTGTTTAAGGTCTCTAAGTATGAAAGGACGCACACATGGAAAAAAGTCCTGAGGAAACAAGACCATAAGCAATCTAAGAGTTGGGTTATAGCCAAAAGAATCC
AGTCGAAGTATGAAGATGTTAGTCGTGGTTATAGGCCCAAAGAAATAATTCAGAATTTCCTAAAGGAGTTTGACATTGATCTGTCGTAGGATAGGGCTGAGGGCT
CGAGAGGCCACACTTTTGATGGTAAGGGGTTCCCCCAGAGAAATTTACGCTTTATTGGCTCGGTTTGGAGAAGCATTAAAGATTACCAATTCGGGAACTTAATAT
AATTTGAAGGTTGATCTAGATGGTCATTTTTGG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGGAAAGCAACAAACCCGATTCCCCTAATCCCAACCTTAAATGCTCACATATATCGACTAAGGTCTGCGAGCTAATTCCTTTCACTAGGAATATGTGT
CCCTTAGAGTTGGGAGACGATGGAAATGGCTTCGATGTCCAAGTACATCATGAAGAATTACCACTTAAGGAATGTGTAGTGGAAAGTGACGACGAAGAATTTCCT
CCAACAATTGGCAAGAAAAAGTGAAAGTGTGTTGAAAAGTTGTTGGAACGCACCATTTTTTTTCGTGTGCATAGAAACTAAGGGCTACGAAACTGAAAGATTCTG
ATCTGTTTAAGGTCTCTAAGTATGAAAGGACGCACACATGGAAAAAAGTCCTGAGGAAACAAGACCATAAGCAATCTAAGAGTTGGGTTATAGCCAAAAGAATCC
AGTCGAAGTATGAAGATGTTAGTCGTGGTTATAGGCCCAAAGAAATAATTCAGAATTTCCTAAAGGAGTTTGACATTGATCTGTCGTAGGATAGGGCTGAGGGCT
CGAGAGGCCACACTTTTGATGGTAAGGGGTTCCCCCAGAGAAATTTACGCTTTATTGGCTCGGTTTGGAGAAGCATTAAAGATTACCAATTCGGGAACTTAATAT
AATTTGAAGGTTGATCTAGATGGTCATTTTTGG
Protein sequenceShow/hide protein sequence
MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKKKCVEKLLERTIFFRVHRN*GLRN*KILI
CLRSLSMKGRTHGKKSGNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGTYNLK
VDLDGHFW