; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G056580 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G056580
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationchrH03:9355716..9357952
RNA-Seq ExpressionChy3G056580
SyntenyChy3G056580
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]1.15e-4698.77Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]1.40e-47100Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

XP_022131273.1 transcription and mRNA export factor SUS1 [Momordica charantia]1.40e-47100Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]1.15e-4698.77Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]1.15e-4698.77Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY28.0e-3688.3Show/hide
Query:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        ++Q T + ++   LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Subjt:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY24.0e-3587.23Show/hide
Query:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        ++Q T + ++   LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY26.1e-36100Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY23.0e-3598.77Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY26.8e-3597.53Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FL STAI
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

SwissProt top hitse value%identityAlignment
Q3ZBJ0 Transcription and mRNA export factor ENY21.8e-2468.75Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q6DH42 Transcription and mRNA export factor ENY21.4e-2464.37Show/hide
Query:  QSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL
        +S  R+A+   LIE GE+ERLKELLR +LIECGW+D++KALC+  +++KG  NV+V+DLV  +TPKGRA VPDSVK ELLQRIR+FL
Subjt:  QSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL

Q6NQ54 Transcription and mRNA export factor ENY23.8e-2762.77Show/hide
Query:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Subjt:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

Q9JIX0 Transcription and mRNA export factor ENY21.8e-2468.75Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q9NPA8 Transcription and mRNA export factor ENY21.8e-2468.75Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).2.7e-2862.77Show/hide
Query:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
        K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Subjt:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5.1e-1957.53Show/hide
Query:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCAGAGGAT
GATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGA
GGCTAATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACT
CCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCAGAGGAT
GATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGA
GGCTAATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACT
CCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA
Protein sequenceShow/hide protein sequence
MGLILQASIHGYNRHALISAATGGLLLIGLRRLNQRMIENTNPLFKNQSTSRSAVYSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVIT
PKGRASVPDSVKAELLQRIRSFLGSTAI