; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G056780 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G056780
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationchrH03:9520906..9523240
RNA-Seq ExpressionChy3G056780
SyntenyChy3G056780
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]2.14e-23897.93Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

KAG6598627.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.56e-20988.53Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSL-TQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+NFK   QTS  T LTSRQ FWHQ MRSFSL SQPCRSKRG+FK++AGWLF+GGGQ     IERSENANNDILI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSL-TQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE EVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF
        LAYESAEYSFRLGQK RHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF

Query:  YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDD-EQQGDD
        YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQDD EQ+GDD
Subjt:  YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDD-EQQGDD

XP_004144184.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucumis sativus]3.54e-23497.93Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPR+EVPF+  DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]1.50e-23898.22Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]6.77e-22893.49Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSWRRNFK+FKQTSLTQLTSRQCFW+QCMRSFSLTSQPC  KRG+FK++AGWLFKGGGQE GG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD E FDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPR+EVPFDPQDDEQ+GDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein2.4e-18297.93Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPR+EVPF  +DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A1S3BCC1 uncharacterized protein LOC1034884817.8e-18698.22Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 11.0e-18597.93Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGG IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic3.2e-16388.24Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQPCR KRG+FK++AGWLF+GGGQ     IERSENANNDILI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE EVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF
        LAYESAEYSFRLGQK RHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF

Query:  YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X29.3e-16387.02Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF
        MVQDLSIH++T+LGDP VYGS LSWR N   FKQTS T LTSRQ FWHQ MRSFSL SQPCRSKRG+FK++AGWLF+GGGQ     IERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY
        AYESAEY+FRLGQK +HKIFGYRGVICGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        GVD+AGDFIP++QLREKYNRPRHEVP+D Q DDEQ+GDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 212.2e-0726.06Show/hide
Query:  LNIIRLRADLQKAVESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++HK +GY  VI G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQKAVESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKY
        QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKY

Q5R5S1 F-box only protein 212.6e-0832.73Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +
Subjt:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic5.0e-11364.58Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRS--KRGSFKIRAGWLFKGGGQES-GGHIERSENANNDI
        MVQ  S+  +T  G   V  S L  R N         + L   +C   Q +R         +S  +R   ++ A W F+GGG++      ERSE+AN DI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRS--KRGSFKIRAGWLFKGGGQES-GGHIERSENANNDI

Query:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASA
        LIFFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE ESLA SA
Subjt:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSF
        K LA+E AEY+FRLGQK+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLLAPE+PD ERFDHPY SF
Subjt:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSF

Query:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        L+YG D+AGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDE

Q6D6C5 Heat shock protein HspQ8.5e-0432.56Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDP-VCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHP
        F LGQ++RHK+ G+ GVI  +DP    E+ +W EI+  +      ++P+Y V+++   +   +  Y+AE +L+  E       DHP
Subjt:  FRLGQKVRHKIFGYRGVICGMDP-VCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHP

Q8VDH1 F-box only protein 211.3e-0726.06Show/hide
Query:  LNIIRLRADLQKAVESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++HK +GY  VI G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQKAVESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKY
        QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein3.5e-11464.58Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRS--KRGSFKIRAGWLFKGGGQES-GGHIERSENANNDI
        MVQ  S+  +T  G   V  S L  R N         + L   +C   Q +R         +S  +R   ++ A W F+GGG++      ERSE+AN DI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRS--KRGSFKIRAGWLFKGGGQES-GGHIERSENANNDI

Query:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASA
        LIFFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE ESLA SA
Subjt:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSF
        K LA+E AEY+FRLGQK+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLLAPE+PD ERFDHPY SF
Subjt:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSF

Query:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        L+YG D+AGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein3.3e-9677.27Show/hide
Query:  LNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQ
        K+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLLAPE+PD ERFDHPY SFL+YG D+AGDFIP+KQ
Subjt:  KVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQ

Query:  LREKYNRPRHEVPFDPQDDE
        LREKYNRPRHEVPFD QD++
Subjt:  LREKYNRPRHEVPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATTTGTCAATTCACGCTATGACAGCCTTGGGAGATCCAAATGTTTATGGATCAGCTCTTTCATGGAGGAGGAATTTCAAGTATTTCAAGCAGACA
AGTCTAACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGCAGCTTTTCCTTAACTAGCCAACCCTGTAGATCGAAACGAGGAAGTTTTAAGATC
AGAGCTGGATGGTTGTTTAAAGGAGGTGGACAAGAGTCAGGTGGTCATATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGAC
CTGGCAACACGGGTACAGTATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAATGAAGCTAACCGAGGTTGAAGCAGAAGTCATCAAGCAGCAA
GAATCGAAAAAGGGGTTAACTTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAATTAT
GCTTTGGCTGCACAACTGCGGGATGAAATTTCAAAATTGGAAACTGAGTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGA
TTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTT
GAAAAATTATCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAGTAGATGTTCGTACAGACCCAGATTTACTGGTTGCATATGTTGCCGAGGAAAATCTTCTT
GCTCCCGAAGAACCAGATACGGAGAGGTTCGACCATCCATATAGTTCCTTCTTATTCTATGGAGTGGATTCAGCCGGGGATTTCATTCCTATAAAGCAACTGCGA
GAGAAGTACAATCGACCTCGACACGAAGTACCTTTTGATCCTCAAGATGATGAGCAACAGGGTGACGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGGATTTGTCAATTCACGCTATGACAGCCTTGGGAGATCCAAATGTTTATGGATCAGCTCTTTCATGGAGGAGGAATTTCAAGTATTTCAAGCAGACA
AGTCTAACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGCAGCTTTTCCTTAACTAGCCAACCCTGTAGATCGAAACGAGGAAGTTTTAAGATC
AGAGCTGGATGGTTGTTTAAAGGAGGTGGACAAGAGTCAGGTGGTCATATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGAC
CTGGCAACACGGGTACAGTATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAATGAAGCTAACCGAGGTTGAAGCAGAAGTCATCAAGCAGCAA
GAATCGAAAAAGGGGTTAACTTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAATTAT
GCTTTGGCTGCACAACTGCGGGATGAAATTTCAAAATTGGAAACTGAGTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGA
TTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTT
GAAAAATTATCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAGTAGATGTTCGTACAGACCCAGATTTACTGGTTGCATATGTTGCCGAGGAAAATCTTCTT
GCTCCCGAAGAACCAGATACGGAGAGGTTCGACCATCCATATAGTTCCTTCTTATTCTATGGAGTGGATTCAGCCGGGGATTTCATTCCTATAAAGCAACTGCGA
GAGAAGTACAATCGACCTCGACACGAAGTACCTTTTGATCCTCAAGATGATGAGCAACAGGGTGACGATTGA
Protein sequenceShow/hide protein sequence
MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPCRSKRGSFKIRAGWLFKGGGQESGGHIERSENANNDILIFFFQLD
LATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFR
LGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLR
EKYNRPRHEVPFDPQDDEQQGDD