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Chy3G057190 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G057190
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchrH03:9803550..9812595
RNA-Seq ExpressionChy3G057190
SyntenyChy3G057190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036648.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.74e-1143.21Show/hide
Query:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVH
        +RIH GRQG+P   +  F E  +L +         K    T+T  S ++AT  RHV TH TYWWDV++I T+S I I  VH
Subjt:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVH

KAA0036833.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]6.64e-1361.67Show/hide
Query:  LDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        + LLSIRCS  LKSS +T+ DIS S AT+ R VPTH T+W DV++IGTSS   I AVH R
Subjt:  LDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

KAA0047084.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.61e-1144.58Show/hide
Query:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        E I   +    R FVLDFN++ +   +  +     K    T+ DIS S+ATQ R V TH T+W D+++IGTSSA  I AVHFR
Subjt:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

KAA0056430.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]6.67e-1246.05Show/hide
Query:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAIT
        E I   +    RFFV DFN++ +   +  RCS  LKS    + + S S AT  R VPTH TYWWDV++I TSS  T
Subjt:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAIT

TYK05071.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.60e-1144.58Show/hide
Query:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        E I   +    R FVLDFN++ +   +  +     K    T+ DIS S+ATQ R V TH T+W D+++IGTSSA  I AVHFR
Subjt:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

TrEMBL top hitse value%identityAlignment
A0A5A7T1N6 NBS-LRR type resistance protein9.6e-1061.67Show/hide
Query:  LDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        + LLSIRCS  LKSS +T+ DIS S AT+ R VPTH T+W DV++IGTSS   I AVH R
Subjt:  LDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

A0A5A7TVU9 CACTA en-spm transposon protein3.1e-0848.61Show/hide
Query:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        R FVLDFN++ +   +  +     K    T+ DIS S+ATQ R V TH T+W D+++IGTSSA  I AVHFR
Subjt:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

A0A5A7UMS0 CACTA en-spm transposon protein1.4e-0850.77Show/hide
Query:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAIT
        RFFV DFN++ +   +  RCS  LKS    + + S S AT  R VPTH TYWWDV++I TSS  T
Subjt:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAIT

A0A5D3BZH2 CACTA en-spm transposon protein3.1e-0848.61Show/hide
Query:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR
        R FVLDFN++ +   +  +     K    T+ DIS S+ATQ R V TH T+W D+++IGTSSA  I AVHFR
Subjt:  RFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVHFR

A0A5D3DRU8 NBS-LRR type resistance protein9.0e-0843.21Show/hide
Query:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVH
        +RIH GRQG+P   +  F E  +L         + K    T+T  S ++AT  RHV TH TYWWDV++I T+S I I  VH
Subjt:  ERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITI*AVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCCGCTGTCTTAAGTGGGCTGATGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCGCTTTTTCGTGCTTGATTTCAACGAGAAGCACTTACTAGATTTGTT
GAGCATCAGATGCTCACATCTTTTAAAGAGTTCATGAGTGACTATCACCGACATTTCAAACAGTTCAGCGACCCAGAACAGGCATGTGCCAACCCACCTAACATATTGGT
GGGACGTATTGAAGATTGGCACTTCCTCTGCAATCACTATATGAGCTGTGCATTTCAGGTGAGATTTACGAATTCCAATGATATACAAGTTT
mRNA sequenceShow/hide mRNA sequence
AGTCCGCTGTCTTAAGTGGGCTGATGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCGCTTTTTCGTGCTTGATTTCAACGAGAAGCACTTACTAGATTTGTT
GAGCATCAGATGCTCACATCTTTTAAAGAGTTCATGAGTGACTATCACCGACATTTCAAACAGTTCAGCGACCCAGAACAGGCATGTGCCAACCCACCTAACATATTGGT
GGGACGTATTGAAGATTGGCACTTCCTCTGCAATCACTATATGAGCTGTGCATTTCAGGTGAGATTTACGAATTCCAATGATATACAAGTTT
Protein sequenceShow/hide protein sequence
SPLSVG*CWERIH*GRQGRPRFFVLDFNEKHLLDLLSIRCSHLLKSS*VTITDISNSSATQNRHVPTHLTYWWDVLKIGTSSAITIAVHFR*DLRIPMIYKF