CuGenDBv2

Gene ID	Chy3G057260
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	chalcone synthase-like
Genome location	chrH03:9942700..9943161
RNA-Seq Expression	Chy3G057260
Synteny	Chy3G057260
Gene Ontology terms	NA
InterPro domains	IPR001099 - Chalcone/stilbene synthase, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

ABK92282.2 chalcone synthase [Polygonum cuspidatum]

4.94e-10

36.31

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK
        KRY+HLTEEILK N N+     SS+     R D   S   R+         I+EWGQP         S I H      S   +P      T  L      
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK

Query:  KIHVI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
        K  ++  +GCF  GTALRL KDLAE+T    VLV  S ++ +    P    +D    QALF DG  A+
Subjt:  KIHVI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

CAB4309152.1 unnamed protein product [Prunus armeniaca]

9.40e-11

36.16

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDA------KRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL
        KRYLH+TEEILKANPNI      S+    PR D       K   +  +++       I+EWGQPI        S+I H      S+  +P   A +  QL
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDA------KRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL

Query:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSML---PPFVSMDP---QALFSDGEAA
         K +         +I  +GCF  GTALRL KD+AE+     +++V     +M    P    +D    QALFSDG AA
Subjt:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSML---PPFVSMDP---QALFSDGEAA

KAF7075724.1 hypothetical protein CFC21_080480, partial [Triticum aestivum]

4.59e-10

33.33

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRS---SQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL--H
        KRY+H+TEEILK NPN+           +P  DA++     ++        H  I+EWGQP+        S I H      S   +P      T  L  H
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRS---SQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL--H

Query:  KKIH--VI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSMLP-------PFVSMDPQALFSDGEAAM
          +   ++  +GCF  GT LR+ KDLAE+     VLV  S ++ +           SM  QALF DG AA+
Subjt:  KKIH--VI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSMLP-------PFVSMDPQALFSDGEAAM

PNX57799.1 chalcone synthase, partial [Trifolium pratense]

2.42e-10

35.12

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK
        KRY+HLTEEILK NP++      S+     R D       R+         I+EWGQP         S I H      S   +P      T  L    H 
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK

Query:  KIHVI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
        K +++  +GCF  GT LRL KDLAE+     VLV  S ++ +    P    +D    QALF DG AA+
Subjt:  KIHVI*PRGCFVAGTALRLPKDLAESTL---VLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

XP_008227360.1 PREDICTED: 3,5-dihydroxybiphenyl synthase-like [Prunus mume]

7.54e-11

35.96

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDA------KRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL
        KRYLH+TEEILKANPNI +    S+    PR D       K   +  +++       I+EWGQPI        S+I H      S+  +P   A +  QL
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDA------KRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL

Query:  HKKI--------HVI*PRGCFVAGTALRLPKDLAE---STLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
         K +         +I  +GCF  GTALRL KD+AE   S  VLV    ++ +    P    +D    QALF+DG +A+
Subjt:  HKKI--------HVI*PRGCFVAGTALRLPKDLAE---STLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

TrEMBL top hits

e value

%identity

Alignment

A0A341W6Y5 Uncharacterized protein

7.8e-08

33.33

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRS---SQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*Q--LH
        KRY+H+TEEILK NPN+           +P  DA++     ++        H  I+EWGQP+        S I H      S   +P      T    LH
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRS---SQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*Q--LH

Query:  KKIH--VI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM
          +   ++  +GCF  GT LR+ KDLAE+     VLV  S ++ +           SM  QALF DG AA+
Subjt:  KKIH--VI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM

A0A5E4GL21 PREDICTED: chalcone

1.0e-07

34.27

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL
        KRYLH+TEEILKANPNI     +S+    PR D       K   +  +++       I+EWGQPI        S+I H      S   +P        QL
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL

Query:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSML---PPFVSMD---PQALFSDGEAAM
         K +         +I  +GCF  GTALRL KD+AE+     +++V     +M    P    +D    QALF+DG +A+
Subjt:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSML---PPFVSMD---PQALFSDGEAAM

A0A6J5XAT5 Uncharacterized protein

2.1e-08

35.59

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL
        KRYLH+TEEILKANPNI      S+    PR D       K   +  +++       I+EWGQPI        S+I H      S+  +P        QL
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL

Query:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSM---LPPFVSMD---PQALFSDGEAA
         K +         +I  +GCF  GTALRL KD+AE+     +++V     +M    P    +D    QALFSDG AA
Subjt:  HKKI--------HVI*PRGCFVAGTALRLPKDLAEST----LVLVFLSFVSM---LPPFVSMD---PQALFSDGEAA

A1E0A0 Chalcone synthase

7.8e-08

36.31

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK
        KRY+HLTEEILK N N+     SS+     R D   S   R+         I+EWGQP         S I H      S   +P      T  L      
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK

Query:  KIHVI*PRGCFVAGTALRLPKDLAEST---LVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM
        K  ++  +GCF  GTALRL KDLAE+T    VLV  S ++ +           SM  QALF DG  A+
Subjt:  KIHVI*PRGCFVAGTALRLPKDLAEST---LVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM

H9DV62 Chalcone synthase

7.8e-08

36.31

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK
        KRY+HLTEEILK N N+     SS+     R D   S   R+         I+EWGQP         S I H      S   +P      T  L      
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL----HK

Query:  KIHVI*PRGCFVAGTALRLPKDLAEST---LVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM
        K  ++  +GCF  GTALRL KDLAE+T    VLV  S ++ +           SM  QALF DG  A+
Subjt:  KIHVI*PRGCFVAGTALRLPKDLAEST---LVLVFLSFVSML-------PPFVSMDPQALFSDGEAAM

SwissProt top hits

e value

%identity

Alignment

O22586 Chalcone synthase

2.3e-09

33.92

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---
        +RY++LTEEILK NPN+           +P  DA++     ++           I+EWGQP         S I H      S   +P      T  L   
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---

Query:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
         H K +++  +GCF  GT LRL KDLAE+     VLV  S V+ +    P    +D    QALF DG AA+
Subjt:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

P23569 Chalcone synthase

1.0e-09

33.92

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---
        KRY++LTEEILK NPN+           +P  DA++     ++           I+EWGQP         S I H      S   +P      T QL   
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---

Query:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
         + K +++  +GCF  GT LRL KDLAE+     VLV  S ++ +    P    +D    QALF DG AA+
Subjt:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

P48389 Chalcone synthase

1.4e-09

35.12

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QLHKKIHV
        KRY++LTEEILK NPN+     SS+     R D   S   R+         I+EWGQP         S I H      S   +P      T  L  +  V
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QLHKKIHV

Query:  ----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
            +  +GCF  GT LRL KDLAE+     VLV  S ++ +    P   ++D    QALF DG  A+
Subjt:  ----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

P51082 Chalcone synthase 1B

1.0e-09

33.92

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---
        KRY+HLTEEILK NP++           +P  DA++     ++           I+EWGQP         S I H      S   +P      T  L   
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSS---QIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL---

Query:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
         H K +++  +GCF  GT LRL KDLAE+     VLV  S ++ +    P    +D    QALF DG AA+
Subjt:  -HKKIHVI*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

Q9LKP7 Chalcone synthase

1.4e-09

35.12

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QLHKKIHV
        KRY++LTEEILK NPN+     SS+     R D   S   R+         I+EWGQP         S I H      S   +P      T  L  +  V
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QLHKKIHV

Query:  ----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
            +  +GCF  GT LRL KDLAE+     VLV  S ++ +    P   ++D    QALF DG  A+
Subjt:  ----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

Arabidopsis top hits

e value

%identity

Alignment

AT5G13930.1 Chalcone and stilbene synthase family protein

9.1e-09

32.18

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Query:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL
        KR++HLTEE LK NP++      S+     R D       K   +  +++       I+EWGQP         S I H      S   +P      T  L
Subjt:  KRYLHLTEEILKANPNIYVQTWSSIIECSPRND------AKRSSQIRIRSSFENHYYIQEWGQPI**YQILYTSHILHYFNQLHSWA*LPSL*ASWT*QL

Query:  HKKIHV----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM
          +  V    +  +GCF  GT LR+ KDLAE+     VLV  S ++ +    P    +D    QALFSDG AA+
Subjt:  HKKIHV----I*PRGCFVAGTALRLPKDLAES---TLVLVFLSFVSML----PPFVSMDP---QALFSDGEAAM

Sequences

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CDS sequence

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AAACGTTACTTACATTTGACTGAAGAGATATTAAAGGCAAACCCTAATATATATGTGCAAACATGGAGCTCCATCATTGAATGCTCGCCAAGAAATGATGCAAAA
AGAAGTTCCCAAATTAGGATAAGAAGCAGCTTTGAAAACCATTATTATATTCAAGAATGGGGTCAACCAATATAATAATATCAAATATTATACACATCTCATATT
TTGCACTACTTCAACCAACTCCATTCCTGGGCCTGATTGCCATCTCTCTAAGCTTCTTGGACTTGACAACTCCACAAAAAAATTCATGTTATATAACCAAGAGGT
TGTTTTGTAGCTGGCACTGCCCTTCGTTTACCTAAGGATCTTGCTGAGAGTACGTTGGTGCTCGTTTTCTTGTCGTTTGTGTCGATGTTACCACCATTTGTTTCC
ATGGACCCTCAAGCCTTATTTTCTGACGGCGAAGCTGCCATG

mRNA sequence

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Protein sequence

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KRYLHLTEEILKANPNIYVQTWSSIIECSPRNDAKRSSQIRIRSSFENHYYIQEWGQPIYQILYTSHILHYFNQLHSWA*LPSL*ASWT*QLHKKIHVI*PRGCF
VAGTALRLPKDLAESTLVLVFLSFVSMLPPFVSMDPQALFSDGEAAM

Chy3G057260 (gene) of Cucumber (hystrix) v1 genome