; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G057540 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G057540
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionreplication factor C subunit 3-like
Genome locationchrH03:10484610..10505240
RNA-Seq ExpressionChy3G057540
SyntenyChy3G057540
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005663 - DNA replication factor C complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003689 - DNA clamp loader activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR013748 - Replication factor C, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016477.1 Replication factor C subunit 3 [Cucurbita argyrosperma subsp. argyrosperma]1.85e-13793.93Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDN HVTERLRYVIEAERLDVTEGGLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNP+PKDIEQISFWLLNEPFSD FKRI EIKTRKGLALVDIVREVTLFVFKI+MPS++RVQL+NDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

XP_004149801.1 replication factor C subunit 3 [Cucumis sativus]8.78e-14397.66Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLAD+EYRMTFGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFTGARSALV AAQ
Subjt:  SFTGARSALVAAAQ

XP_008466735.1 PREDICTED: replication factor C subunit 5 [Cucumis melo]1.68e-14096.73Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTE GLAALVRLCSGDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFKI+MPSNIRVQLINDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

XP_023550699.1 replication factor C subunit 3-like [Cucurbita pepo subsp. pepo]1.30e-13794.39Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDN HVTERLRYVIEAERLDVTEGGLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNP+PKDIEQISFWLLNEPFSD FKRI EIKTRKGLALVDIVREVTLFVFKI+MPS++RVQLINDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

XP_038886416.1 replication factor C subunit 3 [Benincasa hispida]2.26e-13894.86Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERL+YVIEAERLDVTE GLAALVRLCSGDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFK++MPS+IRV+LINDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

TrEMBL top hitse value%identityAlignment
A0A0A0KDS9 AAA domain-containing protein2.6e-11397.66Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLAD+EYRMTFGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFTGARSALV AAQ
Subjt:  SFTGARSALVAAAQ

A0A1S3CRX1 replication factor C subunit 51.4e-11196.73Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTE GLAALVRLCSGDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFKI+MPSNIRVQLINDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

A0A5A7UJX6 Replication factor C subunit 51.4e-11196.73Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTE GLAALVRLCSGDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSD FKRISEIKTRKGLALVDIVREVTLFVFKI+MPSNIRVQLINDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

A0A6J1FMN6 replication factor C subunit 3-like1.5e-10893.46Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLDN HVTERLRYVIEAERLDVTE GLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNP+PKDIEQISFWLLNEPFSD FKRI EIKTRKGLALVDIVREVTLFVFKI+MPS++RVQL+NDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSALVAAAQ
Subjt:  SFTGARSALVAAAQ

A0A6J1K1F8 replication factor C subunit 3-like3.3e-10892.52Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTKNTRFAL+CNHVNKIIPALQSRCTRFRFAPLD FHVTERLRYVIEAERLDVTE GLAALVRLC+GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        QHITEEAVYLCTGNP+PKDI+QISFWLLNEPFSD FKRI EIKTRKGLALVDIVREVTLFVFKI+MPS++RVQL+NDLAD+EYRM+FGCNDKLQLGSLIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAAQ
        SFT ARSAL+AAAQ
Subjt:  SFTGARSALVAAAQ

SwissProt top hitse value%identityAlignment
P40937 Replication factor C subunit 56.6e-6656.34Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMT+DAQ ALRRVIEK+T+NTRF L+CN+++KIIPALQSRCTRFRF PL    +  RL +V+E E++D++E G+ ALV L SGDMR+ALNILQST+MA 
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
          +TEE VY CTG+P+  DI  I  W+LN+ F+  ++ I+E+KT KGLAL DI+ E+ LFV +++ PS++R+ L+  +AD+EYR++ G N+K+QL SLI+
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAA
        +F   R  +VA A
Subjt:  SFTGARSALVAAA

Q54ST4 Probable replication factor C subunit 57.6e-5451.92Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        D+MT  AQ ALRRVIEKYTK TRF ++CN+V KIIPALQSRCTRFRF+PL       RL+ +IE E + V    + A++ L  GDMRK LNILQS  M+S
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  --QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSL
           +ITEEA+Y CTG PMP DIE +  WLLN  + + F+ IS++K +KGL+L DI+  +  FV +I++ + I  +L++ L+D+EY ++ G ++KLQLGSL
Subjt:  --QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSL

Query:  ISSFTGAR
        +  F  +R
Subjt:  ISSFTGAR

Q6YZ54 Replication factor C subunit 31.0e-9579.34Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEK+T++TRFAL+CNHVNKIIPALQSRCTRFRFAPLD  HV ERL+++I++E LDV +GGL ALVRL +GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
        + ITEEAVYLCTGNPMPKDIEQI++WLLNE FS  FK IS++K RKGLALVDI+REVT+FVFKI+MPS++R++LINDLAD+EYR++F CNDKLQLG+LIS
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAA
        +FTGAR+A+VAAA
Subjt:  SFTGARSALVAAA

Q9CAQ8 Replication factor C subunit 53.7e-9376.13Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTK+TRFAL+ NHVNKIIPALQSRCTRFRFAPLD  H+++RL++VIEAERL V++ GLAALVRL +GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEA--------VYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDK
        + ITEE         VYLCTGNP+PKDIEQIS WLLN+PF +C+K +SEIKTRKGLA+VDIV+E+TLF+FKI+MPS +RVQLINDLAD+EYR++FGCNDK
Subjt:  QHITEEA--------VYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDK

Query:  LQLGSLISSFTGARSALVAAAQ
        LQLG++IS+FT ARS +V AA+
Subjt:  LQLGSLISSFTGARSALVAAAQ

Q9D0F6 Replication factor C subunit 57.3e-6556.34Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMT+DAQ ALRRVIEK+T+NTRF L+CN+++KIIPALQSRCTRFRF PL    +  RL +V++ E +D++E G+ ALV L SGDMR+ALNILQST+MA 
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS
          +TEE VY CTG+P+  DI  I  W+LN+ F+  +K I E+KT KGLAL DI+ EV LFV +++ PS++R+ L+  +AD+EYR++ G ++K+QL SLI+
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLIS

Query:  SFTGARSALVAAA
        +F   R  +VA A
Subjt:  SFTGARSALVAAA

Arabidopsis top hitse value%identityAlignment
AT1G21690.1 ATPase family associated with various cellular activities (AAA)5.6e-2030.84Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA
        D+MT+DAQ ALRR +E Y+K TRF  +CN++++II  L SRC +FRF PL    ++ R+ ++   E L +    L+ L  +  GD+R+A+  LQS T + 
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA

Query:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL
           IT   +   +G    + + ++     +  F    K +  I   +G     I+ +  LF    E  S+I    + ++   LA+ + R+  G ++ LQL
Subjt:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL

Query:  GSLISSFTGARSAL
          + SS   A S +
Subjt:  GSLISSFTGARSAL

AT1G21690.2 ATPase family associated with various cellular activities (AAA)5.6e-2030.84Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA
        D+MT+DAQ ALRR +E Y+K TRF  +CN++++II  L SRC +FRF PL    ++ R+ ++   E L +    L+ L  +  GD+R+A+  LQS T + 
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA

Query:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL
           IT   +   +G    + + ++     +  F    K +  I   +G     I+ +  LF    E  S+I    + ++   LA+ + R+  G ++ LQL
Subjt:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL

Query:  GSLISSFTGARSAL
          + SS   A S +
Subjt:  GSLISSFTGARSAL

AT1G21690.4 ATPase family associated with various cellular activities (AAA)5.6e-2030.84Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA
        D+MT+DAQ ALRR +E Y+K TRF  +CN++++II  L SRC +FRF PL    ++ R+ ++   E L +    L+ L  +  GD+R+A+  LQS T + 
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQS-THMA

Query:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL
           IT   +   +G    + + ++     +  F    K +  I   +G     I+ +  LF    E  S+I    + ++   LA+ + R+  G ++ LQL
Subjt:  SQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNI----RVQLINDLADLEYRMTFGCNDKLQL

Query:  GSLISSFTGARSAL
          + SS   A S +
Subjt:  GSLISSFTGARSAL

AT1G63160.1 replication factor C 26.4e-2431.78Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        D+MT  AQ ALRR IE Y+ +TRFAL CN   KII  +QSRC   RF+ L +  +  RL  V+ AE++     GL A++    GDMR+ALN LQ+T    
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFS---DCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGS
          + +E V+     P P  ++ I   +L   F    D  K++ ++    G +  DI+  +   +   +M   ++++ + +      R+  G    LQL  
Subjt:  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFS---DCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGS

Query:  LISSFTGARSALVA
        L++  +  R    A
Subjt:  LISSFTGARSALVA

AT1G77470.1 replication factor C subunit 32.6e-9476.13Show/hide
Query:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
        DAMTKDAQFALRRVIEKYTK+TRFAL+ NHVNKIIPALQSRCTRFRFAPLD  H+++RL++VIEAERL V++ GLAALVRL +GDMRKALNILQSTHMAS
Subjt:  DAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS

Query:  QHITEEA--------VYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDK
        + ITEE         VYLCTGNP+PKDIEQIS WLLN+PF +C+K +SEIKTRKGLA+VDIV+E+TLF+FKI+MPS +RVQLINDLAD+EYR++FGCNDK
Subjt:  QHITEEA--------VYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDK

Query:  LQLGSLISSFTGARSALVAAAQ
        LQLG++IS+FT ARS +V AA+
Subjt:  LQLGSLISSFTGARSALVAAAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCTAGCGGAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGAAGAGTAATTGAGAAATACACAAAAAATACAAGGTTTGCTCTTATGTGTAATCAC
GTCAATAAGATTATTCCAGCATTACAATCAAGGTGTACCCGCTTTCGATTTGCCCCCCTTGATAACTTTCATGTCACTGAACGACTCAGATATGTTATTGAGGCT
GAGAGGTTGGACGTCACTGAGGGTGGCTTAGCTGCTCTTGTTCGACTTTGCAGTGGTGATATGAGAAAGGCCTTAAATATCCTGCAGTCAACGCACATGGCTTCT
CAGCATATTACTGAAGAAGCTGTATACCTTTGCACAGGGAACCCAATGCCCAAAGACATTGAGCAAATATCATTTTGGCTGCTGAATGAACCATTTTCTGACTGT
TTTAAGCGAATATCTGAAATAAAGACCAGAAAAGGATTGGCTTTGGTTGATATAGTGAGAGAAGTCACTCTGTTCGTTTTTAAGATAGAGATGCCATCGAATATC
AGAGTCCAGTTGATTAACGATCTGGCTGATTTAGAGTACAGGATGACTTTCGGATGCAATGACAAGTTACAACTCGGATCGCTCATCTCATCTTTTACAGGAGCT
AGATCTGCTCTTGTTGCTGCTGCACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGCTAGCGGAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGAAGAGTAATTGAGAAATACACAAAAAATACAAGGTTTGCTCTTATGTGTAATCAC
GTCAATAAGATTATTCCAGCATTACAATCAAGGTGTACCCGCTTTCGATTTGCCCCCCTTGATAACTTTCATGTCACTGAACGACTCAGATATGTTATTGAGGCT
GAGAGGTTGGACGTCACTGAGGGTGGCTTAGCTGCTCTTGTTCGACTTTGCAGTGGTGATATGAGAAAGGCCTTAAATATCCTGCAGTCAACGCACATGGCTTCT
CAGCATATTACTGAAGAAGCTGTATACCTTTGCACAGGGAACCCAATGCCCAAAGACATTGAGCAAATATCATTTTGGCTGCTGAATGAACCATTTTCTGACTGT
TTTAAGCGAATATCTGAAATAAAGACCAGAAAAGGATTGGCTTTGGTTGATATAGTGAGAGAAGTCACTCTGTTCGTTTTTAAGATAGAGATGCCATCGAATATC
AGAGTCCAGTTGATTAACGATCTGGCTGATTTAGAGTACAGGATGACTTTCGGATGCAATGACAAGTTACAACTCGGATCGCTCATCTCATCTTTTACAGGAGCT
AGATCTGCTCTTGTTGCTGCTGCACAGTAG
Protein sequenceShow/hide protein sequence
MHASGDAMTKDAQFALRRVIEKYTKNTRFALMCNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCSGDMRKALNILQSTHMAS
QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDCFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADLEYRMTFGCNDKLQLGSLISSFTGA
RSALVAAAQ