; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G057560 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G057560
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchrH03:10524260..10525947
RNA-Seq ExpressionChy3G057560
SyntenyChy3G057560
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035961.1 uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa]1.33e-3260.75Show/hide
Query:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR
        EEE P+   A LGGI++LSAMK++SS K+P+  G +Y++A  NNKAAL MLD GAT N++D EEAKRLGL+ TRR DT++KIISA   +N+GWA++V+TR
Subjt:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR

Query:  VGKWQGE
        VG WQG+
Subjt:  VGKWQGE

KAA0067893.1 uncharacterized protein E6C27_scaffold138G00500 [Cucumis melo var. makuwa]4.41e-2342.52Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        MAS+EGYESPVEQV+EGPT  G   QRSPS+R K     T+D  + H A LE   E+V+  +G+ S+  E L+ +N ++  A K +IK +  S  +D+  
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHALRKDVDELH
        L  +V N++KF+E E++ L K+V+ ++
Subjt:  LIVEVTNMRKFMEDELHALRKDVDELH

KAE8637433.1 hypothetical protein CSA_004611, partial [Cucumis sativus]3.68e-10255.12Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        MASREGYESPVEQV+EGPTT GRAAQRSPSR+ KATTSTTRD VEE FATLEGKLEEV++KLG+TSELMEELLVD+A+V K TKAMI+ LRDSH KDI+D
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHALRKDVDE---------------------------------------------------------------------------
        LIVEVTNMRKFME+ELHALRKDVDE                                                                           
Subjt:  LIVEVTNMRKFMEDELHALRKDVDE---------------------------------------------------------------------------

Query:  --------------------LHEGEEE-APVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRR
                            LH+ EEE  P+P+EAHLGGIQ+L AMK   SSK+P G+G +Y++A LNN+AAL +LDTGATSNIIDLEEAKRLGLKITRR
Subjt:  --------------------LHEGEEE-APVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRR

Query:  GDTKLKIISAMPTRNVGWARNVETRVGKWQGE
         D +LKII+A PTRN GWA NV+ ++G+W+G+
Subjt:  GDTKLKIISAMPTRNVGWARNVETRVGKWQGE

KAE8646814.1 hypothetical protein Csa_005402 [Cucumis sativus]1.24e-4169.16Show/hide
Query:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR
        EEE P+P+EAHLGGIQ+L AMK   SSK+P G+G +Y++A LNN+AAL +LDTGATSNIIDLEEAKRLGLKITRR D +LKII+A PTRN GWA NV+ +
Subjt:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR

Query:  VGKWQGE
        +G+W+G+
Subjt:  VGKWQGE

TYK04320.1 uncharacterized protein E5676_scaffold527G00540 [Cucumis melo var. makuwa]1.13e-2343.31Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        MAS+EGYESPVEQV+EGPT  G   QRSPS+R K     T+D  + H A LE   E+V+  +G+ S+  E L+ +N ++  A K MIK +  S  +D+  
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHALRKDVDELH
        L  +V N++KF+E E++ L K+V+ ++
Subjt:  LIVEVTNMRKFMEDELHALRKDVDELH

TrEMBL top hitse value%identityAlignment
A0A5A7T2W8 Retrotrans_gag domain-containing protein6.1e-2860.75Show/hide
Query:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR
        EEE P+   A LGGI++LSAMK++ SSK+P+  G +Y++A  NNKAAL MLD GAT N++D EEAKRLGL+ TRR DT++KIISA   +N+GWA++V+TR
Subjt:  EEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVGWARNVETR

Query:  VGKWQGE
        VG WQG+
Subjt:  VGKWQGE

A0A5A7T2W8 Retrotrans_gag domain-containing protein8.1e-1262.3Show/hide
Query:  SELMEELLVDNADVKKATKAMIKGLRDSHDKDIYDLIVEVTNMRKFMEDELHALRKDVDEL
        S LM+EL+ DN ++  A K MIK L DSH K++YD++VEVTN+RKF+E+ELHALRK+VDE+
Subjt:  SELMEELLVDNADVKKATKAMIKGLRDSHDKDIYDLIVEVTNMRKFMEDELHALRKDVDEL

A0A5A7T2W8 Retrotrans_gag domain-containing protein4.6e-2327.13Show/hide
Query:  DAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYDLIVEVTNMRKFMEDELHALRKDVDELHE-------------
        +  +E  A LE  LEEV+ K+GK S  MEEL+ DN ++ K TK MIKGL  S+ K++YDL+VEVTN+RKF+++ELH LRKDVDE HE             
Subjt:  DAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYDLIVEVTNMRKFMEDELHALRKDVDELHE-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------GEEEAPVPKEAHLGGIQ
                                                                                            EEEAP+   A L  I+
Subjt:  -----------------------------------------------------------------------------------GEEEAPVPKEAHLGGIQ

Query:  FLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVG
        +LS M+ND  SK+P+  GW+Y++  LN+K AL +LDT    N++D EEAK+LGL+ITRR DT++KIISA P RN G
Subjt:  FLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNVG

A0A5A7THC0 Reverse transcriptase domain-containing protein4.6e-1541.18Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        M++ EG+ SPVEQVIEGP T GR  Q SP+RR+K+     R+ V+     LE  +E+V+  +G+ SE+ EEL+ +NA++    K MI+ +  +  K++ +
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHAL
        L   VT ++ F+E ELH L
Subjt:  LIVEVTNMRKFMEDELHAL

A0A5A7VIG6 Uncharacterized protein5.8e-1842.52Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        MAS+EGYESPVEQV+EGPT  G   QRSPS+R K     T+D  + H A LE   E+V+  +G+ S+  E L+ +N ++  A K +IK +  S  +D+  
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHALRKDVDELH
        L  +V N++KF+E E++ L K+V+ ++
Subjt:  LIVEVTNMRKFMEDELHALRKDVDELH

A0A5D3BYX0 Uncharacterized protein2.0e-1843.31Show/hide
Query:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD
        MAS+EGYESPVEQV+EGPT  G   QRSPS+R K     T+D  + H A LE   E+V+  +G+ S+  E L+ +N ++  A K MIK +  S  +D+  
Subjt:  MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYD

Query:  LIVEVTNMRKFMEDELHALRKDVDELH
        L  +V N++KF+E E++ L K+V+ ++
Subjt:  LIVEVTNMRKFMEDELHALRKDVDELH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAGGGAAGGATACGAATCACCGGTTGAGCAAGTCATTGAAGGACCAACGACAAGTGGACGTGCTGCACAACGTTCCCCATCCCGACGGACGAAGGCAACAAC
GTCGACAACGAGGGACGCTGTCGAAGAACATTTTGCAACCTTGGAGGGAAAATTGGAGGAAGTGAAGAAGAAATTAGGCAAGACGAGCGAGTTGATGGAGGAGCTACTCG
TAGATAATGCCGATGTCAAAAAAGCCACTAAGGCTATGATCAAAGGCCTTAGAGACTCTCACGACAAAGATATCTACGACCTCATTGTGGAGGTAACCAACATGCGCAAA
TTCATGGAAGATGAGCTCCATGCCTTGCGTAAGGACGTCGACGAGCTCCACGAAGGAGAAGAGGAAGCGCCTGTACCGAAGGAGGCACACTTGGGTGGAATTCAATTCCT
AAGTGCCATGAAGAACGATTCTTCCTCTAAACAACCCAAGGGAAGAGGTTGGATGTACCTGGAGGCCAAACTCAACAACAAGGCTGCCTTACCTATGCTGGATACCGGCG
CAACCAGCAACATCATTGATCTAGAAGAGGCCAAGCGGCTAGGTCTCAAGATCACTAGGAGAGGCGACACTAAGTTGAAGATCATCAGTGCCATGCCCACTCGTAACGTC
GGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGAGAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAGGGAAGGATACGAATCACCGGTTGAGCAAGTCATTGAAGGACCAACGACAAGTGGACGTGCTGCACAACGTTCCCCATCCCGACGGACGAAGGCAACAAC
GTCGACAACGAGGGACGCTGTCGAAGAACATTTTGCAACCTTGGAGGGAAAATTGGAGGAAGTGAAGAAGAAATTAGGCAAGACGAGCGAGTTGATGGAGGAGCTACTCG
TAGATAATGCCGATGTCAAAAAAGCCACTAAGGCTATGATCAAAGGCCTTAGAGACTCTCACGACAAAGATATCTACGACCTCATTGTGGAGGTAACCAACATGCGCAAA
TTCATGGAAGATGAGCTCCATGCCTTGCGTAAGGACGTCGACGAGCTCCACGAAGGAGAAGAGGAAGCGCCTGTACCGAAGGAGGCACACTTGGGTGGAATTCAATTCCT
AAGTGCCATGAAGAACGATTCTTCCTCTAAACAACCCAAGGGAAGAGGTTGGATGTACCTGGAGGCCAAACTCAACAACAAGGCTGCCTTACCTATGCTGGATACCGGCG
CAACCAGCAACATCATTGATCTAGAAGAGGCCAAGCGGCTAGGTCTCAAGATCACTAGGAGAGGCGACACTAAGTTGAAGATCATCAGTGCCATGCCCACTCGTAACGTC
GGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGAGAGGCTTAG
Protein sequenceShow/hide protein sequence
MASREGYESPVEQVIEGPTTSGRAAQRSPSRRTKATTSTTRDAVEEHFATLEGKLEEVKKKLGKTSELMEELLVDNADVKKATKAMIKGLRDSHDKDIYDLIVEVTNMRK
FMEDELHALRKDVDELHEGEEEAPVPKEAHLGGIQFLSAMKNDSSSKQPKGRGWMYLEAKLNNKAALPMLDTGATSNIIDLEEAKRLGLKITRRGDTKLKIISAMPTRNV
GWARNVETRVGKWQGEA