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Chy3G057610 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G057610
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchrH03:10617308..10619906
RNA-Seq ExpressionChy3G057610
SyntenyChy3G057610
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040447.1 transposase [Cucumis melo var. makuwa]1.58e-2580.3Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
        +DIL IPVS VASESAF TGG VVD SRCSLA KTVEA ICTQNWLN DPI L FQHELE AS FE
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
KAA0044877.1 transposase [Cucumis melo var. makuwa]1.43e-2680.3Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
        +DIL IPVS VASES F TGG VVD SRCSLALKTVEA ICTQNWLN DPI L FQHELE AS FE
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
KAA0055026.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.58e-2777.94Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGD
        +DIL IP+S VAS+SAF TGGHVVD SRCSLA KTVEA ICTQNWLN DPIDL  QHELE AS FE D
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGD
KAA0066355.1 transposase [Cucumis melo var. makuwa]2.84e-2678.79Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
        +DIL IPVSIV SES F TGG VVD SRCSLA KTVEA ICTQNWLN DPI L FQHELE AS FE
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
TYK28262.1 transposase [Cucumis melo var. makuwa]1.54e-2580.3Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
        +DIL IPVS VASESAF TGG VVD SRCSLA KTVEA ICTQNWLN DPI L FQHELE AS FE
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFE
TrEMBL top hitse value%identityAlignment
A0A5A7TSL6 Transposase1.4e-1970Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
        +DIL IPVS VASES F TGG VVD SRCSLALKTVEA ICTQNWLN DPI L FQHELE AS FE   R  ++ E+  E
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
A0A5A7U843 Zinc finger BED domain-containing protein RICESLEEPER 2-like7.3e-2174.03Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEE
        +DIL IPVS VASESAF TGGHVVD SRCSLA KTVEAFICTQNWLN DPI L FQHELE AS FE   R  ++ E+
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEE
A0A5A7U9T4 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.8e-1970Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
        +DIL IPVS VASESAF TGG VVD S CSLALKTVEA ICTQNWLN DPI L FQHELE AS FE   R  ++ E+  E
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
A0A5A7UL54 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.7e-2068.75Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
        +DIL IP+S VAS+SAF TGGHVVD SRCSLA KTVEA ICTQNWLN DPIDL  QHELE AS FE D      E+E+++
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEEMKE
A0A5D3CJE5 Zinc finger BED domain-containing protein RICESLEEPER 3-like7.3e-2174.03Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEE
        +DIL IPVS VASESAF TGGHVVD SRCSLA KTVEAFICTQNWLN DPI L FQHELE AS FE   R  ++ E+
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELE*ASNFEGDSRKNIKEEE
SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase1.3e-0656.52Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWL
        +D+L I VS VASESAF  GG VVD  R  L  + VEA ICT++W+
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWL
P08770 Putative AC transposase1.3e-0656.52Show/hide
Query:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWL
        +D+L I VS VASESAF  GG VVD  R  L  + VEA ICT++W+
Subjt:  QDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGTCTAACAAGATATTTTGGTTATTCCAGTTTCTATTGTAGCGTCTGAGTCAGCTTTTTGTACCGGAGGACATGTTGTTGATTAATCACGTTGCTCATTGGCTCTTAA
AACAGTGGAGGCTTTCATATGTACTCAAAATTGGCTAAATTTTGATCCAATAGATCTTTAATTTCAACATGAATTAGAATAGGCTTCAAATTTTGAAGGAGATTCCAGGA
AAAATATAAAAGAGGAAGAGATGAAGGAAAAGAGGAGATATTTGGGAGAAAAAAAAAAACCCTAGCCGCCGCATGACTGAAGCAGCCGCTGTTCGACGACG
mRNA sequenceShow/hide mRNA sequence
AAGGTCTAACAAGATATTTTGGTTATTCCAGTTTCTATTGTAGCGTCTGAGTCAGCTTTTTGTACCGGAGGACATGTTGTTGATTAATCACGTTGCTCATTGGCTCTTAA
AACAGTGGAGGCTTTCATATGTACTCAAAATTGGCTAAATTTTGATCCAATAGATCTTTAATTTCAACATGAATTAGAATAGGCTTCAAATTTTGAAGGAGATTCCAGGA
AAAATATAAAAGAGGAAGAGATGAAGGAAAAGAGGAGATATTTGGGAGAAAAAAAAAAACCCTAGCCGCCGCATGACTGAAGCAGCCGCTGTTCGACGACG
Protein sequenceShow/hide protein sequence
KVQDILVIPVSIVASESAFCTGGHVVD*SRCSLALKTVEAFICTQNWLNFDPIDL*FQHELEASNFEGDSRKNIKEEEMKEKRRYLGEKKKP*PPHD*SSRCSTT