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Chy3G058030 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G058030
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSel1-like protein
Genome locationchrH03:11431416..11431961
RNA-Seq ExpressionChy3G058030
SyntenyChy3G058030
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]5.46e-3078.67Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ LNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]3.30e-3181.33Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISGAT+ALNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]3.16e-2977.33Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ L+RVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]4.49e-2976Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ L+RVPLSE           D LKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]9.05e-2976Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ALNRVPLSE           D L EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
TrEMBL top hitse value%identityAlignment
A0A0A0LCP0 Uncharacterized protein1.4e-2281.33Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISGAT+ALNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
A0A0A0LWU3 Uncharacterized protein1.4e-2281.33Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISGAT+ALNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
A0A1S3B5I4 uncharacterized protein LOC1034862541.1e-2178.67Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ LNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
A0A5D3DNP0 Sel1-like protein1.1e-2178.67Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ LNRVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
A0A6J1DSS4 uncharacterized protein LOC1110240624.4e-2177.33Show/hide
Query:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        MEISG T+ L+RVPLSE           D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSS
Subjt:  MEISGATQALNRVPLSE-----------DILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)4.2e-1677.08Show/hide
Query:  EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        +D L+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSS
Subjt:  EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
AT5G05360.1 unknown protein1.6e-1554.17Show/hide
Query:  SGATQALNRVPLS-----------EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        +  +  +NRVPL+           +D LKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR RSS
Subjt:  SGATQALNRVPLS-----------EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
AT5G05360.2 unknown protein1.6e-1554.17Show/hide
Query:  SGATQALNRVPLS-----------EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS
        +  +  +NRVPL+           +D LKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR RSS
Subjt:  SGATQALNRVPLS-----------EDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGTGGAGCAACACAGGCCTTGAATCGCGTTCCTTTATCAGAAGACATTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAAT
GTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGGCGATCGTCG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGTGGAGCAACACAGGCCTTGAATCGCGTTCCTTTATCAGAAGACATTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAAT
GTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGGCGATCGTCG
Protein sequenceShow/hide protein sequence
MEISGATQALNRVPLSEDILKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRRRSS